Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN13528

FASTA Sequence
Unigene ID: UN13528Length: 664  SNP
GGAGAACCAAATATCCAAATCACTAAACCAATCTTCTTACAGACATAAAAAATGCAGGGAGCTTTGTGCATCAAACCTACCATTGT
TCCACTTTCTTCTCCAAAGCTCACTCTTCTTCTTCCTCACATCATCTCCACCACCAAAGCTTCAAGACTCTCTTCTTCTCTCAGAC
TCAGACCAAACTCATCATCACCTTCAACCTCTGATCCACTCACCGTAAACTACGATGACTCTCCCCTTTCTGTTTTCCCAGCTGAA
GCATGTGAAGTGATCAGCGGTTACGCATGTTCTGCTGACATTTACCCTGAAGTCAAGCTTGAAACAAAGCCAGTCTCACCTCCCGT
GGCTTCAGAGCCTGTAGACCGAGAATACCTAGAGTATAACAACCCCAAAACAGTTTTCCCCGCAGAGGCTTGTGATGATCTTGGAG
GAGAATTCTGCGAACCTGACTATCAAAAAGATGTCTACTAGAAAGAAAGAAGAAGCCAGATTTTATGTGATGTGAATATGTGTGTT
GTTGTATCTCTACTAGTCTCTGTAACCACTCTTAGTATATGAAGTCTAGCTTCACTTAATCAATGAATGTGAATCAGACACAAGTC
CCGAAAGTCAATCAAAAGGTTAACATTGATGTTACTATCTTTTGGCACTTCATTTGAAGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABV89628 light regulated protein-like protein [Brassica rapa]6712e-068
AAM19704 light regulated protein-like protein [Eutrema halophilum]5368e-053
XP_002875337 hypothetical protein ARALYDRAFT_484447 [Arabidopsis lyrata subsp. lyrata]5171e-050
NP_189308 CCR-like protein [Arabidopsis thaliana]5108e-050
XP_002269300 PREDICTED: hypothetical protein [Vitis vinifera]3271e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q03200 Light-regulated protein2192e-017

TrEMBL top hits (Blast detail)Scoree value
A8IXK8 Light regulated protein-like protein6711e-068
Q8S2S6 Light regulated protein-like protein5366e-053
Q96500 A.thaliana mRNA (orf19) from chromosome III5106e-050
Q84N27 CCR protein3252e-028
Q41016 GA protein3215e-028

Arabidopsis top hits (Blast detail)Scoree value
AT3G26740.1 CCL (CCR-LIKE)5104e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
714  64%
 
66  27%
 
81  5%
 
111  5%

Unigene MembersMember information