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Information for unigene UN13536
| FASTA Sequence |
| Unigene ID: UN13536 | Length: 1276 |
SSR | SNP | GGTGAAAGCTCATCGAGGTTTAAAATAAATAAAAAACCTGCACAGTACGTAAGTACAAACTCCTTAAAGCACAACTGAATTTTTGA
AGGATAACAAACAAACACAACTCTCGCATATAATCTAATAATCTCCCTTACAAGTACTAATAATAATCTGCGACTGTTTAGGGGTT
CATGGACTTAGTCTTGACGCCAATCTTCTTCCAAGAAACACTAGGCATGATCTGCTTCGTGTCCACACGATCCTTAAACTGAACAG
CAAAGTTGAGCAACGAATCAAGAAGTGACTCAGAGAGATAGTGAGGCTCAAGTCCAAGTTCCATCAGCTTAGTGTGCTTTGCGTTG
TAGTAATGCTCTTCCGCCTCCACTCTCGGGTTAGGCACCGTCATCTTAGTCACGTCTAGCCCCAGCTTCAAACCCGCTTTAGTCAC
CAGCGATGCCAGTTCGTTGACTGAGAACTGTTCTGTGAACTGGTTGAATACCCTGAACTCACCAGCCTTTGCAGGGTTCGCTATAG
CTAGCTCAACACATTGGACCGTGTCTCTAATATCAAGGTAGCCTCTTGTCTGACCACCTTTGCCGTAAACCGTAAGTGGGTGACCA
ACAGCAGCTTGGACACAGAACCGGTTAAGAGCAGTACCAAACACAGCATCATAATCCAACCGGTTACGCAGCTCCTCGTGCATCTC
AGTCTCATCAGTCTTCACACCATAAACAACTCCTTGGTTAAGATCAGTAGCTCTAATACCCCAAGCCTTGCAAGTGAAAGCAATGT
TGTGGGAGTCGTGAACTTTGCTAAGATGATAAAACGAGCTCGCCTGCTTCGGATACGGCAGCGTATCAGTCCTACCGTTATGCGTT
ATCGTTATATAACCTTCCTCGATATCGATATTCGGAGTCCCGTACTCCCCCATCGTTCCCAGTTTCACGAGATGACACTCTTCTCG
AAACTCTTTGATAGCAAAGAGGACGTTGAGAGTCCCGATGACGTTGTTGTGCTGCGTGAAGGGAGTTGGGGGTTGAAGAAGGTTTG
GTTTAAACCAAACGGTTTAACCGAGTTCTTGGTGCTGCTGCTGCTGCTTACTGAGATAGCTAAAGGGCATGAAGCTGAGAGTAGAT
GCGCCATTTTTTTAAAAAAGGTCGTTCCTTGTTTTTCTATCAAGAAAACAGTCACACTTGAAGTGACTGAGGTCTTAGGAGCTTGT
TCAGAGTCGAGAAGAAGCTTGAAAGTCTTTTGAAGTGAGGGGAGGATTTTGTTTTTCTCTCTCTTCTCGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869229 hypothetical protein ARALYDRAFT_491388 [Arabidopsis lyrata subsp. lyrata] | 1440 | 4e-157 |
| 1QRR Chain A, Crystal Structure Of Sqd1 Protein Complex With Nad And Udp- Glucose | 1434 | 2e-156 |
| NP_195029 UDP-sulfoquinovose synthase [Arabidopsis thaliana] | 1434 | 2e-156 |
| 1I24 Chain A, High Resolution Crystal Structure Of The Wild-Type Protein Sqd1, With Nad And Udp-Glucose | 1434 | 2e-156 |
| BAH20373 AT4G33030 [Arabidopsis thaliana] | 1434 | 2e-156 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48917 UDP-sulfoquinovose synthase, chloroplastic | 1434 | 8e-158 |
| Q84KI6 UDP-sulfoquinovose synthase, chloroplastic | 1315 | 5e-144 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DI06 AT4G33030 protein (Fragment) | 1434 | 1e-156 |
| B9HDL9 Predicted protein | 1361 | 4e-148 |
| B9RRR0 UDP-sulfoquinovose synthase, putative | 1355 | 2e-147 |
| C0LIR3 UDP-sulfoquinovose synthase | 1352 | 4e-147 |
| A2Y473 Putative uncharacterized protein | 1343 | 4e-146 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G33030.1 SQD1; UDPsulfoquinovose synthase/ sulfotransferase | 1434 | 7e-159 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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