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Information for unigene UN13539

FASTA Sequence
Unigene ID: UN13539Length: 925 SSR 
GGACACGCATCAAAAAAACTATGAAGTCATCACGCATTGATTTTTCCATGTTCAACAGTCAAGGACAACACGATGAGGACAACATG
TCACGTCTTCCATGGAAGAGGGTCAGAGACGAGGACGAAGAGCTTGCCAACTGTCTTGTGTTGCTGTCCAATTCAGGGAGTGATTA
CAACAAGGGGCATGTACACATCAAAGATAAAACCGTGAAAAAACAAAAAACCGCACATGTTTTCCAATGCAAAGGTTGCAAGAAAG
TGTTTGCGTCGCATCAGGCATTGGGTGGACACAGGGCAAGTCACAAGAAAGTGAAAGGTTGTTTTGCCTCTCAAGATAAAAAAGCG
GAGGAGGAAGAAGAGGAGGAATACAAAGTGGACGACGACGATGAGGAGGAGGAGGAGGAGGAAGAGGACAAGCCTCACATCATCGC
CAGAAAGAAAACTAACGCTCACGAATGCACGATCTGCCATCGCGTATTCTCATCAGGACAAGCCTTGGGAGGTCACAAGAGATGTC
ATTGGTTAACACCTTCCACTAATTATCTTCGTATGACGCCACTAAATGATTCTTCTACTCATCACCATCATTCTCAGCCGCTAGAT
CAGCCATCTCTAGATCTCAACTTAGCTTGCGTTGATCCAACGGTCATGAGCGTAGGGAGAGATGGTGGTGGCAACAATCTCAATGC
TACTTCATCTAATTCATGGTTAAAACTCGCTAGTGGTGACTGGTCGTGATGACTGACTAATAAATTGAGTTGATGATTTTATATTC
ATTCGCTTATATACACATAAATATACTCACATACAATTAAAGTACATTAATCAATTTATAAATTTGTAATGGATTTTATTATATTA
ATATACGCTTCACGTTTCAGAGAGCCTAGTTTATTTAGGGGATGTTAGAACTTTGACATTGTTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_171706 C2H2-type zinc finger protein [Arabidopsis thaliana]8157e-085
XP_002889340 hypothetical protein ARALYDRAFT_333453 [Arabidopsis lyrata subsp. lyrata]8121e-084
BAA19114 PEThy;ZPT4-1 [Petunia x hybrida]3238e-028
CBI16587 unnamed protein product [Vitis vinifera]3156e-027
XP_001773376 predicted protein [Physcomitrella patens subsp. patens]3084e-026

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3EDL3 At1g020408155e-085
P93717 PEThy;ZPT4-13235e-028
A9T450 Predicted protein (Fragment)3083e-026
B9IBW5 Predicted protein3012e-025
A5C074 Putative uncharacterized protein2993e-025

Arabidopsis top hits (Blast detail)Scoree value
AT1G02040.1 zinc finger (C2H2 type) family protein8162e-087
AT2G28200.1 nucleic acid binding / transcription factor/ zinc ion binding2061e-016
AT2G17180.1 zinc finger (C2H2 type) family protein1612e-011
AT4G35280.1 zinc finger (C2H2 type) family protein1559e-011
AT5G56200.1 zinc finger (C2H2 type) family protein1307e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  40%
 
82  40%
 
91  20%

Unigene MembersMember information