 |
Information for unigene UN13543
| FASTA Sequence |
| Unigene ID: UN13543 | Length: 1476 |
SSR | | ACTAATACAAGGGTTGTTGTATGAATTTGGAACAGAGTCAAAGTAGACCAATCCTTTTTCAATTACAAAGGTAAGCGTTCCCAAAC
AACTACTGACAAACAAACAAACAAACAAACAAACAGGCCAAAAAAGGCAACCCAAGAGACTTGTAGGGAGATTTTGAATAAATAGA
ATAAACAAAAAGGGTTAAAACGACAAACAAATGCAGAATCTGAGTTACCAGATTTGGTAACATAATTTACTAAAAGGACCTGTTTC
ATTGATCAGAGTTAAGGGCTTTGGAGATCCATTCTGATGCTGCTGCTTCAGTTTCTGAATCCAAACTTGGAAGTAGAGACATAGGA
GTCACAGAGACAAAACCATCTTCCAGAGCCTTGATATCCATATCTTCATCCGTATGTTCTTGTTCTTTAGCCACAAACTCTAGGCG
GAAGTATTTCTTAACACGGCTATCAGTTTTAGCAGCAACTCCAACAGATTCAATCTCCACAATACTCTTCTTCTGTGTGGTGAAAC
GACGAGCCGCTCCAGCAGCAGAAGCATCTCTCCCAAGCTGGGCAAGTTGAGCTCCTAGGCTTTGTTGGTTGGACATGAAATTCCCA
GCGCCAGGGTGACGGTTAGCTGAAACGGCTTGCCAGCTAGGACTCTTCTTCCACATGCTTTGTTTTGTTACCTTAAAACCCTTGTT
CGATGAGGGTGATGTGGGAATTTCTATGTTGAGAGAGCAGTCTTTAGGGAAAACTCCTTTCTCAATGTCTCTGATTGTGGCGTTTA
TCAAAGGTAGACAGACACCAACAGCGTCCTTAAAGTCACTTTCTTTGCTTTCATCTTTCTTCCAGTTCAATGATATACACAAAGAG
GGTACTCCGGAAATCAAAGCTTCCCTGGCTCCAGCCACTGCGCCAGAATAGAACATTTGGTGCCCACAGCTTGATCCCTGATTGAT
TCCACTAATTACCAGTATTGGTTTTGACCAAGCGAAAAGGGCTCCGGATAATCCTAATGAGATGCAGTCCACAGGAGTCCCTGAAA
CTTCAAAGGCCGTGGCACCTTTGATAGTAACAGAACTCGCAGCAATGGTTTCTCCAGGAGTCATAGAATGAGACGAAACCGATTTA
TCCGTTTGAGGAGCACAGACGTGGACGTTGTATAGGCCTTCGTTAACCAAAGCCTCAACGAGAGAGACGAGTCCAACCGAATCAAT
CCCATCTCCGTTGGTGACTAGAACGATGGGTCTTGAGTCTGAGTCTGAGTCATCGATCTCCTCCTTGGCCGCAGCAACATCAACGG
AGTCAGAAGTAGACGGAGGAGGCTCCTCGTTTACTCCTTTTCTCTTGGAGAGAACGTCCTGGAGATTCGAGACGAGCGCGGCTGAC
AAGCCGTTGTTCTTGGAGGTCATCGTGTAGATTGAAAGAGAGAGGAAGAAGAGAAGCAGATGATGTGGGTCTGTGGAGAAGAAAGT
TGGACAGAGAGCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_177431 survival protein SurE-like phosphatase/nucleotidase [Arabidopsis thaliana] | 1696 | 9e-187 |
| XP_002888898 hypothetical protein ARALYDRAFT_476423 [Arabidopsis lyrata subsp. lyrata] | 1678 | 1e-184 |
| BAH57142 AT1G72880 [Arabidopsis thaliana] | 1450 | 3e-158 |
| ABK94047 unknown [Populus trichocarpa] | 1360 | 9e-148 |
| XP_002329066 predicted protein [Populus trichocarpa] | 1348 | 2e-146 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A8FK82 5'-nucleotidase surE | 269 | 1e-022 |
| Q9PIK6 5'-nucleotidase surE | 269 | 1e-022 |
| A1VY14 5'-nucleotidase surE | 269 | 1e-022 |
| Q5HWH7 5'-nucleotidase surE | 269 | 1e-022 |
| B9KDQ8 5'-nucleotidase surE | 267 | 2e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84MD7 At1g72880 | 1696 | 6e-187 |
| C0Z363 AT1G72880 protein | 1450 | 2e-158 |
| A9PCE4 Putative uncharacterized protein | 1360 | 6e-148 |
| B9N1C3 Predicted protein | 1348 | 1e-146 |
| B9MWU0 Predicted protein | 1303 | 2e-141 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G72880.2 acid phosphatase survival protein SurE, putative | 1697 | 3e-189 |
| AT1G72880.1 acid phosphatase survival protein SurE, putative | 1697 | 3e-189 |
| AT4G14930.1 acid phosphatase survival protein SurE, putative | 505 | 4e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
