RadishBase

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Information for unigene UN13548

FASTA Sequence

Unigene ID:UN13548

Length: 1239

GGTCATTTGATAGATTAATATTGATAATATTGGACTTGGAGTTATACAAATAAGACACCAAGATCGCAATCCTTCCGGAAGAAACG
AAGTCCTTATGGAGCAGAACGAGATCGAAAAATAGAAGACATGGCCTTAAAATCAAGCAAGATACGTAATGAATCAACATCTCCAC
AGGAACATCAATGATGTAGAATCTCACTCAGAAGTAGAATCTAACTGTTTAAGCCTTATGAATCTTTTGGCTGCTCTGTTCTGAAA
GAATCTGCTTTGTCTTTTCCAGTACTCCAAAGAAAATTGAACCTCCAATACCTATCCACAATACCCTTGGACCCATTCCCTTCCAC
AAAGCTGATGACCCTTCTTCTCTTAATATCGTCTTAACGCAATCCGAGAACCCTTTATACTGATTTCCTGCGCCCTGAACCATTAG
CCTGGTTTTGATTACGTCCAGAGGAGTGGTCAAAACTCCAGTGACAGCACCAGCAACTGCACCAAGCATTGCGTTCTCTGGATCAT
TTAGATCTCTTCTCGCAGCCAACTTGTATCCGATCCGTAACTGCTCATATACACAAAACTGAAGCGCGTCAAAAGGCAAATCTCGC
AACAAGAAAGATCCGTATCCCGCATACATGCCTCCGAATCCTTCTTTGGCTATAATAAGTCGAACAGCATCAGGTGCCGAAGCAAA
TTGTCCAGTTTGCATCCGCTGTTTAACAACTTCGGTTGGTACACGAACAATAGATGAAACAGCACCTCCTAAAGCACCTGCAGCCA
AATGTGCAACCGCGCTAAACTTTTCAGGTACAACTTTCAGCAGCTTCTGTTTGGTTGGTTCATATACACCGAAAAATAAGGCAGAA
GCAGGTAAGACACCAGCAAGGTTGCCACCAAGACCAGAGTATAACCCTTTCCATATAATCTGCCCTCCATCTCGAGCTACCTGGAC
TCGAGTTTTGATTGTATCAATTGGGTATAGAGCAGCTTCTACAACAAGACCAGCTAATCCTCCTGCTATTAGACTCTCATAAAGGA
GACGCAAGAAATGGCATGGATCATCATCTTGTTTAACACAGATTGTGTCACAACCATTGGTCTGCTTCTTGATAGGATTATTAATA
TTCTTGAATGCCAATTTATCAGGCAAAGCTGTCTGAGATCCTCCATCTCCGCTACTGGAAACAATGCCACGATCCATCTTCAAAAA
TTTACACAGCGAGCGAGCGAGCGAGCCTAGAGCCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
NP_564436 S-adenosylmethionine carrier 2 [Arabidopsis thaliana]	1442	2e-157
XP_002893808 At1g34065 [Arabidopsis lyrata subsp. lyrata]	1442	2e-157
AAY34159 At1g34065 [Arabidopsis thaliana]	1431	4e-156
CBI22773 unnamed protein product [Vitis vinifera]	1117	1e-119
XP_002266180 PREDICTED: hypothetical protein [Vitis vinifera]	1114	2e-119

Swiss-Prot top hits (Blast detail)	Score	E value
Q9VBN7 S-adenosylmethionine mitochondrial carrier protein homolog	452	6e-044
Q6GLA2 S-adenosylmethionine mitochondrial carrier protein	429	3e-041
Q4V9P0 S-adenosylmethionine mitochondrial carrier protein	425	8e-041
A6QR09 S-adenosylmethionine mitochondrial carrier protein	412	2e-039
Q5U680 S-adenosylmethionine mitochondrial carrier protein	410	4e-039

TrEMBL top hits (Blast detail)	Score	E value
Q500W9 At1g34065	1431	3e-156
B9SW87 Mitochondrial carrier protein, putative	1111	3e-119
B9H5L4 Predicted protein	1107	1e-118
A0ZVU2 S-adenosylmethionine transporter	1100	7e-118
C6TJR9 Putative uncharacterized protein	1100	7e-118

Arabidopsis top hits (Blast detail)	Score	E value
AT1G34065.1 SAMC2 (S-adenosylmethionine carrier 2); binding	1446	3e-160
AT4G39460.1 SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1); S-adenosylmethionine transmembrane transporter/ binding	1055	6e-115
AT1G07030.1 mitochondrial substrate carrier family protein	279	6e-025
AT2G30160.1 mitochondrial substrate carrier family protein	273	3e-024
AT5G42130.1 mitochondrial substrate carrier family protein	271	5e-024

EST library breakdown for ESTs in the assembly


12	3			38%


6	2			25%


9	2			25%


8	1			13%

Unigene Members