Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN13548

FASTA Sequence
Unigene ID: UN13548Length: 1239  SNP
GGTCATTTGATAGATTAATATTGATAATATTGGACTTGGAGTTATACAAATAAGACACCAAGATCGCAATCCTTCCGGAAGAAACG
AAGTCCTTATGGAGCAGAACGAGATCGAAAAATAGAAGACATGGCCTTAAAATCAAGCAAGATACGTAATGAATCAACATCTCCAC
AGGAACATCAATGATGTAGAATCTCACTCAGAAGTAGAATCTAACTGTTTAAGCCTTATGAATCTTTTGGCTGCTCTGTTCTGAAA
GAATCTGCTTTGTCTTTTCCAGTACTCCAAAGAAAATTGAACCTCCAATACCTATCCACAATACCCTTGGACCCATTCCCTTCCAC
AAAGCTGATGACCCTTCTTCTCTTAATATCGTCTTAACGCAATCCGAGAACCCTTTATACTGATTTCCTGCGCCCTGAACCATTAG
CCTGGTTTTGATTACGTCCAGAGGAGTGGTCAAAACTCCAGTGACAGCACCAGCAACTGCACCAAGCATTGCGTTCTCTGGATCAT
TTAGATCTCTTCTCGCAGCCAACTTGTATCCGATCCGTAACTGCTCATATACACAAAACTGAAGCGCGTCAAAAGGCAAATCTCGC
AACAAGAAAGATCCGTATCCCGCATACATGCCTCCGAATCCTTCTTTGGCTATAATAAGTCGAACAGCATCAGGTGCCGAAGCAAA
TTGTCCAGTTTGCATCCGCTGTTTAACAACTTCGGTTGGTACACGAACAATAGATGAAACAGCACCTCCTAAAGCACCTGCAGCCA
AATGTGCAACCGCGCTAAACTTTTCAGGTACAACTTTCAGCAGCTTCTGTTTGGTTGGTTCATATACACCGAAAAATAAGGCAGAA
GCAGGTAAGACACCAGCAAGGTTGCCACCAAGACCAGAGTATAACCCTTTCCATATAATCTGCCCTCCATCTCGAGCTACCTGGAC
TCGAGTTTTGATTGTATCAATTGGGTATAGAGCAGCTTCTACAACAAGACCAGCTAATCCTCCTGCTATTAGACTCTCATAAAGGA
GACGCAAGAAATGGCATGGATCATCATCTTGTTTAACACAGATTGTGTCACAACCATTGGTCTGCTTCTTGATAGGATTATTAATA
TTCTTGAATGCCAATTTATCAGGCAAAGCTGTCTGAGATCCTCCATCTCCGCTACTGGAAACAATGCCACGATCCATCTTCAAAAA
TTTACACAGCGAGCGAGCGAGCGAGCCTAGAGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564436 S-adenosylmethionine carrier 2 [Arabidopsis thaliana]14422e-157
XP_002893808 At1g34065 [Arabidopsis lyrata subsp. lyrata]14422e-157
AAY34159 At1g34065 [Arabidopsis thaliana]14314e-156
CBI22773 unnamed protein product [Vitis vinifera]11171e-119
XP_002266180 PREDICTED: hypothetical protein [Vitis vinifera]11142e-119

Swiss-Prot top hits (Blast detail)Scoree value
Q9VBN7 S-adenosylmethionine mitochondrial carrier protein homolog4526e-044
Q6GLA2 S-adenosylmethionine mitochondrial carrier protein4293e-041
Q4V9P0 S-adenosylmethionine mitochondrial carrier protein4258e-041
A6QR09 S-adenosylmethionine mitochondrial carrier protein4122e-039
Q5U680 S-adenosylmethionine mitochondrial carrier protein4104e-039

TrEMBL top hits (Blast detail)Scoree value
Q500W9 At1g3406514313e-156
B9SW87 Mitochondrial carrier protein, putative11113e-119
B9H5L4 Predicted protein11071e-118
A0ZVU2 S-adenosylmethionine transporter11007e-118
C6TJR9 Putative uncharacterized protein11007e-118

Arabidopsis top hits (Blast detail)Scoree value
AT1G34065.1 SAMC2 (S-adenosylmethionine carrier 2); binding14463e-160
AT4G39460.1 SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1); S-adenosylmethionine transmembrane transporter/ binding10556e-115
AT1G07030.1 mitochondrial substrate carrier family protein2796e-025
AT2G30160.1 mitochondrial substrate carrier family protein2733e-024
AT5G42130.1 mitochondrial substrate carrier family protein2715e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  38%
 
62  25%
 
92  25%
 
81  13%

Unigene MembersMember information