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Information for unigene UN13580
| FASTA Sequence |
| Unigene ID: UN13580 | Length: 1481 |
SSR | | CAAGCAGAAAGCACACTCCCACTAATAACACTGTTTAAGACGTTCGTTCGATTGTTTTAATACAAGTTGGTATCATACATATACAG
AGTAAAACGTAGATATATGTCATATCTCACAAGAACAAAAGCGCAATACAAAAAGAAAAACTCTTGGTAAGCTAACCACAGACAGA
CGGTTTATATCCAGCAAAAGGCAAATGAAATCCTTAGTAGTTGATTATGGTTGACTTGTGTGTGTGTGTTAGCGGGCACCACCTTG
ATTCTTCAGCTCTAATAACCAAATCCTTACCTCATTTATTTTCTGGTAACAGGCATAATCACACAGGTTTTAGGTTTCTCAGGGTT
TCCATGGTGCTGGTGGCGGCGGGGGAGTAGGGAACAATGGAGGAACCGCTGAGAATATAGTGTTTTTGTCTATAGTACCAGATGCC
TCCTCTTCACCCGACAATGCCACGAGAGCTGCGACCAGACCAGCATTTCCTGCAAGAGTCGGTTCGGTGTAGTTGTAGTTGGTCCG
TACATCGCGGAACCCATCGCGCTTGTCAGGACCAGCAACCATGGCTCCTTCAATCGTGTTCGGATTCGGTTTCTTGCTGTCTCTCC
ATTTCCATCCTCCTTTGCAGTTGTATTTGACTTTGTTCTTGGGAATCGAAGCTCCTCTGTGATGCACGTGTTTCGGGTATTTTGGG
CCAAACCCTACGAGATAACTCATTTTCCTAGGGTTTTTACCGAGTATGTAATCAATCTGAGTTCTGGCAAACTCTCGTAGGACATT
GGTTGAATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCCAGATAATCACTGTACAACGTAGCTAAGAAAGCTG
CATTTGCAGCATACTGGAGGGGCTGTGGATCTCCATGATTTAACTCTATCAAACCTCCCCTGGTTCTGTTAAATTTGTTGAAATAG
GGCAAGTAGGAGCACATGACTATGCTGGTCTGATTATGAAATGTCCTTAGAATTTCTTCATAAGGATATCCAGGACTCAAAAACAA
CCTCAACCGGCTCAGCAGCAACTGAGCACCAGCAAGCTTGTTGTCCCAGCTAAATACACCATAGTAAGGCCCACCCCAGAAGGCAC
CAGCATGCTTAGCCATAGTTGGCTTTGTGATGAGATCGAGATAAGTTACGTTCCCCGTGGCATAGTATAACCAAGCACCACCCCAA
ATAAACTCATCCCAATACATGCTTGAATTGTAAAACTTGGCTGATTCCGCAGTGCCTGCGCTGTATCTCCCTCTCCGAGTCCTTCC
GAACTGATACACTGTCTTAGCACCATGCACAAGCTTCTTAGAATAGTCTCTGTTGTCTTTGAACACAATGGATGCTGAAGCCAGAG
CAGCCGCCATCTCTGCGGCGAGATCCGAACATCCGCCGTTACAAGTAGTCACAGGCCTTTTGTAGTCCATGTCTTCAGGTAGCATC
CAGCAGTAATGGTCATTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB51903 cellulase [Brassica napus] | 2074 | 1e-230 |
| XP_002865753 hypothetical protein ARALYDRAFT_495032 [Arabidopsis lyrata subsp. lyrata] | 1994 | 3e-221 |
| NP_199783 endoglucanase 25 [Arabidopsis thaliana] | 1991 | 6e-221 |
| AAN72232 At5g49720/K2I5_8 [Arabidopsis thaliana] | 1982 | 6e-220 |
| AAK59818 AT5g49720/K2I5_8 [Arabidopsis thaliana] | 1982 | 6e-220 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38890 Endoglucanase 25 | 1991 | 2e-222 |
| P0C1U4 Endoglucanase 9 | 1625 | 7e-180 |
| Q84R49 Endoglucanase 10 | 1588 | 1e-175 |
| Q9STW8 Endoglucanase 21 | 1571 | 1e-173 |
| Q7XUK4 Endoglucanase 12 | 1252 | 1e-136 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9STD9 Cellulase (Endo-1,4-beta-d-glucanase) | 2074 | 1e-230 |
| Q0KIX2 Endoglucanase | 1784 | 4e-197 |
| B9S075 Endo-1,4-beta-glucanase, putative | 1753 | 2e-193 |
| Q6DMM4 Cel9A | 1747 | 8e-193 |
| Q6QLN2 Endo-1,4-beta-glucanase | 1746 | 1e-192 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G49720.1 ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | 1992 | 2e-223 |
| AT4G24260.1 ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 1577 | 2e-175 |
| AT1G65610.1 KOR2; catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 1174 | 1e-128 |
| AT1G75680.1 AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 674 | 1e-070 |
| AT1G19940.1 AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 668 | 6e-070 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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