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Information for unigene UN13589
| FASTA Sequence |
| Unigene ID: UN13589 | Length: 1007 |
SSR | | ACGTTTCTTCCTAAACTGGTTCTAGTTTTCCGGTTTACACATCCAAGCACAATTAATAAATCATCCTTCTCGTCTTCATCGTCGGA
GAGAGAGAGAGTTAAAGATCTACGAAAGGAAGAAGAAGAAGATGGAGAGCAGACAGGCGGCGAGGATCTCAAAGATCAATGTCTTT
GTATTTGTCGGTCTGATACTATTGAATTCAATCAATCAAATCTCCTCGCTCTCCGTTACAGTCGAGGAAGATGAATGTGTCCAAGA
GTACGTCCTCTACGAAGGAGGCACCGTCTCTGGAAACTTCGTCGTCGTCGACCATGATGTCTTTTGGGGACCAGATCATACCGGTA
TTGATTTCACGGTGACGTCACCAGCTGGGAACATTGTACAGACGTTGAAGGGGACATCAGGAGATAAGTTTGAGTTTAAGGCACCG
AGGAGTGGGATGTACAAGTTTTGTTTCCACAACCCTTACTCTGCTCCTGAGACTGTCTCCTTCTACATTCACGTTGGTCATATCCC
TAACGAGCATGACTTAGCCAAAGACGAACACTTGGACCCGGTGAATGTTAAGATAGCTGATCTGAGAGAGTCTTTGGAATCTGTTG
TTGCTGAGCAGAAGTATCTTAAAGCACGTGATACCCGTCACCGTCATACTAATGAGAGCACGAGAAAGCGAGTGATATTCTACACA
GTAGGAGGGTACATTTTCCTAGCAGCAGCAAGTGGTCTTCAGATTCTCTACATCCGCAAGCTCTTCAGCAAGTCTGTTGCATACAA
CAGAGTTTGAACATAATTGAAACCCCCCCGACATCGTTTTGTCTCCTTTTTTTTTATGTTTTGAATTGGTAACACACCATCTTTTG
AAAATGTTAGTTAATTAAGACCTTAACATTGAAAGACCCCTTTTGTTTTTGTTTTCTCTCCGTATCTACATTTTTCATTAACTTCA
GTTTATTTATGTTTTAACAATGGAGAACTTGATATGCTTACATTCTGATTCATTTGATACC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_188924 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana] | 1016 | 4e-108 |
| XP_002883380 hypothetical protein ARALYDRAFT_479795 [Arabidopsis lyrata subsp. lyrata] | 1013 | 8e-108 |
| XP_002283487 PREDICTED: hypothetical protein [Vitis vinifera] | 885 | 6e-093 |
| XP_002517064 coated vesicle membrane protein, putative [Ricinus communis] | 858 | 8e-090 |
| XP_002315749 predicted protein [Populus trichocarpa] | 856 | 1e-089 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q769F9 Transmembrane emp24 domain-containing protein A | 226 | 7e-018 |
| Q5E971 Transmembrane emp24 domain-containing protein 10 | 177 | 3e-012 |
| Q28735 Transmembrane emp24 domain-containing protein 10 | 176 | 4e-012 |
| O35587 Transmembrane protein Tmp21 | 175 | 6e-012 |
| Q63584 Transmembrane emp24 domain-containing protein 10 | 174 | 7e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIL4 AT3g22845/MWI23_22 | 1016 | 3e-108 |
| B9RTJ5 Coated vesicle membrane protein, putative | 858 | 6e-090 |
| B9HUQ9 Predicted protein | 856 | 9e-090 |
| C6T0D5 Putative uncharacterized protein | 846 | 1e-088 |
| C6SVC0 Putative uncharacterized protein | 842 | 4e-088 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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