 |
Information for unigene UN13591
| FASTA Sequence |
| Unigene ID: UN13591 | Length: 1412 |
| SNP | GTAAGAAAAATGATAAGAGAAATAACCAAGAGGAGCAAAACCAAGTGCAGGAAAACGAGAGGAAGAAGTCCAGAAATGATGTCTAA
GATCAGAGATGAGGTTAATGCTGATTACAAGGGAGTTACGTATGAACCAGATGCTATGGAGCGGCGAAAGATGCAGACGGAGACAC
TATCTGCTGTTTTTGAGACTTACTTCCGTATCCTGAGAAAAACAATGTATTCAATTGGCGAAAGCAGCACAGAAGAAGAAGACACA
ACTTTGGATCCTAACGCCTTCGGTCCGCACCCTTTGCTCGCTCCATGCTTGGATGGGTTGGCGAAATTCACTCAACAATCGGACTT
GGACTACATCGGAGATCTCATGAACTATCTAAAGAAGCTTGCATCTAGCAGTAGCGTCTCCACCGACTCAAAGAAGAAAAACTCGA
AACTACTGACAGTATCTGAACGCCTGAGGTGTTGCCTTGTCGCATTCAAAGTCATGAGGAGCAACTTAAACGCTTTGAACGTTGAC
TTGCAAGACTTCTTTGTCCAGCTTTACAACCTCCTTCTCGAGTACCGCCCTGGAAGAGATTCAGGTGAAGTGTTGGCCGAGTCTCT
GAAGATAATGCTGTGCGACGACAGGCACCAAGACATGCAGAAAGCAGCTGCGTTTGTAAAACGTTTAGCCACATTCGCGCTATGCT
TCGGCTGTGCTGAGTCTATGTCAGCGCTTGTCACATTGAAAATTCTCCTCCAGAGAAACGTCAAATGCAGAAACCTTCTAGAGAAC
GATGCTGGAGGCGGCTCTGTTTCCGGTTCAATCGCAAAGTATCAGCCATACGCAACAGATCCTAACCTAAGCGGGGCTTTCGCATC
AGTGCTATGGGAACTCAACCTCTTGACCAAACACTATCATCCAGCGATCTCAACGATGGCTGGAACAATCTCCAACATGAACACTT
CTCAAAACCAAACGTTTCTCTCTGCAGTGACTCCGCAGCAGGCGTTTGCAGATTACTCTCTTCAGAAGGAATCGTTTGAGCCTAAG
AGCGAGTCTCGGAAGCTGAACAACAAACGGAAACGTGAGAGTGGCGGTGAAGATGTTCCTGAAATCGACATGGGTGAGCTCAGGAA
GAAGCTGAAAGAGAATTTTACCATTCTGCGAGGCATTAAAGAGGACGAGAGGGTGAGAATGGAGTTTGAGTTTCGGAAGAAAAACC
CAACGAAGAAACAGAGTAACGTGGCAAAGAAGAAACCGAAGAGCCCTAAGTCCAAGAAGAGAATTTGAAAAACCCATTTTTTCTTT
TAATGTTATCATTTAAATTTTTGTTGAAACTAGTTTTGAGAATGGTTTTGTCGAAGTGGATTTTCAGTACTTCTCTATATAATATT
TTAGTAATAAATTCTACTAGTTTGTTTTCTTTCCCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889234 hypothetical protein ARALYDRAFT_895820 [Arabidopsis lyrata subsp. lyrata] | 1704 | 1e-187 |
| NP_178036 nucleolar complex-associated protein domain-containing protein [Arabidopsis thaliana] | 1694 | 2e-186 |
| AAC17047 Similar to hypothetical protein YLR002c, gb|Z7314 from S. cerevisiae [Arabidopsis thaliana] | 1465 | 5e-160 |
| AAS49083 At1g79140 [Arabidopsis thaliana] | 1317 | 8e-143 |
| XP_002266128 PREDICTED: hypothetical protein [Vitis vinifera] | 1213 | 9e-131 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5XGZ8 Nucleolar complex protein 3 homolog | 262 | 7e-022 |
| Q6DRN3 Nucleolar complex protein 3 homolog | 237 | 6e-019 |
| Q91Y26 Nucleolar complex protein 3 homolog | 230 | 4e-018 |
| Q8WTT2 Nucleolar complex protein 3 homolog | 229 | 5e-018 |
| Q8VI84 Nucleolar complex protein 3 homolog | 229 | 5e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O64537 YUP8H12R.24 protein | 1465 | 4e-160 |
| Q6NME0 At1g79140 | 1317 | 5e-143 |
| B9RI11 Nucleolar complex-associated protein, putative | 1210 | 1e-130 |
| A5C489 Putative uncharacterized protein | 1199 | 3e-129 |
| C5WWJ1 Putative uncharacterized protein Sb01g032360 | 973 | 4e-103 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
