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Information for unigene UN13592
| FASTA Sequence |
| Unigene ID: UN13592 | Length: 1994 |
SSR | | AACTTTCTAATCTCTATCCACTTCGTTTTCTCTCTCCACATGCCAACGAAGCAATATAGCTATGAAAAGCTAAACCCTTCTTCCTC
TGCTTATTAGATTACTTGTGCTTCATTTTGTTATTCATGATGAATCCAGATCTTGCTTGTTGATTCATGATACAAAAGCTTTTACC
TTTTTGCTCTGAGTTTGTCTTCTTTGTCTGGATGACAGAGATCTAGTCAATATGCTTGGTGAGATGATCTTAGGGGTTGTCTGAGA
TCTGACTTTGCTTTTAAAAGTTTGATTAGTCTGTTGAAGTTAGAAAGTTTGAACCCATATAATAATAGATCGGAGGATGTTTAAGC
AGATACTTGGGAAGCTTCCTAAGAAACCTTCTTCTTCTTCTTCTGCTAAGTTTTGGGATAACAACAACAACAATCAAGTTGATGAG
AGACCATCATCAAATGGAGATTGTGTTGAGGTGTTGCCAAGGCTGAGAGATGTTTCAATCTCCGAGAAGCAAGAACTCTTCCTCAA
GAAGCTTAGGCTATGCTGCGTAGTGTTCGACTTCGTCTCCGAGCCTCCTCAACTTAACCTCAAGGAGAAAGAGATCAAAAGACAAA
CACTTCTCGAAGCTGTGGACTATATCATCTCCTCAGGGAACAAGTTCCCCGAACCAGTTATCCAAGAAGCTACAAACATGGTTTCA
GCTAACCTCTTCAGTAACAACACTCACCAACAGTGGAAGAACAAGAAAACTCCACAAGGATTAGATTCGGAAGAAGCAGAAGAAGA
AGGAGTCGTCTCTTTAAACCCTTCTTGGCCTCACTTGCAGATCATCTACGAGTTCCTCCTTAGACTCGTCGCCTCTCCCAACACAG
ACGCCAAGACATCCAAGAAGTACATCGACCAAACCTTCGTCCTCAAGCTCCTCGACCTGTTCGACTCCGAGGACCACAGGGAGAGA
GAGTACCTCAAAACCATACTCCACCGGATCTACGGGAGGTTCATGTTCCACCGCCCTTTCATCAGGAAGACCATGAACAACATCTT
GTACGACTTCATACTAGAGACAGGGAAACACTCCGGCGTCGCAGAGTTTCTCGAAGTTCTCGGATCAATCATCAACGGATTCGCCT
TGCCTCTCAAGGAAGAGCACAAGCTCTTCCTCACCAGAGTGCTTGTCCCTCTCCACAAACTCAAATGCTTGCCTAGCTACCATCAG
CAGCTCTCTTACTGCGTGATACAGTTCGTTGAGAAAGACTGTGAGCTCGCTGATACGGTGATCAGAGGGTTGTTGAAGTACTGGCC
GGTTACCAACAGCTCTAAAGAACTCATGTTCTTGAATGAGTTGGAGGAGATACTAGAAGCCACTCAGGTGACGGAGTTTGAACGGT
GTATGGTTCCCCTCTCTCGCCAAATCGCTCAGTGCTTGAGCAGCTCTCACTTTCAGGTAGCGGAACGGGCTTTGTACTTATGGAAC
AACGATCATGTTAGTAGTTTGGTGAGACAGAACAGTAGGATTGTTTTACCGATAGTGTTTCCTGCTTTGGAGAAGAACGGTAGTAG
CCATTGGAACCAGGCTGTGAAGAACTTGACTGAGAATGTTCTCAAGGTTTTGTTTGATACGAATCCGGAGCTGTTTGAAGAGTGTT
TGCGCAAGTTTCGAGAAGATCAGCAGAGTACAGAGGATGCTAAGAAGAAGAATGGAGAGACGTGGAGACAGTTAGAGGAGATTGTT
GCTTCCAAAAGACACACATCAATTGAGAAGTGAGAGTTTTTTTTTTATTTCCTGCAGCTTTACACGATACAAAGAAAATATTATTT
TATGTTATGTTTTTTTTTTCTTGGTCTGGTCTTTGACGTATGAAAGGTATATACAGTTTTTACTTGCTTGGTTGCTTCAAGTTTTT
GGTTTTGTAGACAGATGTTTGTCCTTTTTCAGTTCTTGAATTGTCTGTCTGTATACTTCTGTTCATGTAATCATCTTCTTATGAAA
AAACTCGAGTTTTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189232 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 2021 | 3e-224 |
| XP_002875298 hypothetical protein ARALYDRAFT_484365 [Arabidopsis lyrata subsp. lyrata] | 2014 | 2e-223 |
| XP_002314559 predicted protein [Populus trichocarpa] | 1549 | 2e-169 |
| XP_002311732 predicted protein [Populus trichocarpa] | 1536 | 5e-168 |
| XP_002514975 protein phosphatase 2a, regulatory subunit, putative [Ricinus communis] | 1523 | 2e-166 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZQY6 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B' delta isoform | 2021 | 1e-225 |
| Q8LF36 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform | 1482 | 4e-163 |
| Q9LU89 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform | 1464 | 5e-161 |
| Q9LVE2 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform | 1447 | 4e-159 |
| Q8RW96 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform | 1444 | 9e-159 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HTC9 Predicted protein | 1549 | 1e-169 |
| B9HLA9 Predicted protein | 1536 | 3e-168 |
| B9RMK6 Protein phosphatase 2a, regulatory subunit, putative | 1523 | 1e-166 |
| A5BUF9 Putative uncharacterized protein | 1518 | 4e-166 |
| Q0V836 At1g13460 | 1482 | 6e-162 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G26030.1 ATB' DELTA; protein phosphatase type 2A regulator | 2021 | 1e-226 |
| AT1G13460.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1482 | 3e-164 |
| AT1G13460.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1482 | 3e-164 |
| AT3G26020.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1464 | 4e-162 |
| AT3G26020.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1464 | 4e-162 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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