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Information for unigene UN13601
| FASTA Sequence |
| Unigene ID: UN13601 | Length: 1001 |
| SNP | GGTTTACAAATAGAATTGGAAAAACGAGTATAGTATTTTCAAACATAGTGTGTTCCCCTCTATTGAAGTTAATCACATGTAACAAA
AATCATATAATGTGTTGTTGTTTTTTTAAACAATGTTTTGAAGGATTGAAGAAACTGAAATAAAATTCTTGCTGAATCTGTTTGTT
GAGAAGGAACCAACGATCCTGCAAAAACCAAACACCGACCGATACAGGGGCAAAAGCTTTTCAGGCTTGTTTTTCACGAATCCACT
CAACAAAATTGTCGAGAACCAAAGGCCATGCAAGCTCTGGATTGTATTCCGTCATCTCCGGGAAACTTATCTCATTGCAGAACCTG
TAAAAGCCCATCCATTGATCCATGTTTATGACTTTGTAGTCGTTTTGGATCTTTAAGTAGTCGACAAAGTAGTCAACTTGGGGTCG
GAATGTAGATCCCATGACAATCTCCAGGAGTTGACATATAGTCTCTATGTCTATGCTCTTCTGCTTTTCCTCTGTTAAGCAATAGC
GGAAGGCATAAGCATAGAAATCTGCAAAATTTGATTGCCTCCTGACCTCTTTCTCGAGCTCGGGGAGGGATTTCTTCAGTTTACTG
AGTGTATCAGCTCTTAAAGCCTTAAGGCCTCTTCTCCACTCCTCCTGAGTAAAGTAGCCTTGTTTCTCAGATTTCATTTTCCAAGC
AAGCATCAAGATTCTGATATCAGTATGAGGAACATCCAAATTGGAACAGAGCTCCTCTATTCCTTCAGGATCAATGAGATTGGAAG
ATGAATTGGCATACTGATTAAACAAATGGTCTATTCGATCCATCTCTTTAGTCGTCGCCTTACTCGATGCTGAGCGAAAGAGATCC
GTGGCTGAAGATGTGATTGAATCCGATTTCTTCTTAGATGCAGCAGCAGCACAGAACGACGCATCACGAACGCCAAAGCTGAGAGA
GAGACGAAGGCACCTGATTGGATGAGAGAGACAGAGAGACGATTCCTTTCCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001154344 uncharacterized protein [Arabidopsis thaliana] | 1029 | 1e-109 |
| XP_002527318 Defective in cullin neddylation protein, putative [Ricinus communis] | 952 | 1e-100 |
| XP_002303837 predicted protein [Populus trichocarpa] | 930 | 4e-098 |
| XP_002273365 PREDICTED: hypothetical protein [Vitis vinifera] | 924 | 2e-097 |
| XP_002299268 predicted protein [Populus trichocarpa] | 920 | 5e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q92564 DCN1-like protein 4 | 337 | 9e-031 |
| Q8CCA0 DCN1-like protein 4 | 336 | 1e-030 |
| Q1RMX9 DCN1-like protein 5 | 332 | 3e-030 |
| Q5RHX6 DCN1-like protein 4 | 325 | 2e-029 |
| Q9BTE7 DCN1-like protein 5 | 324 | 3e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7XJ64 At1g15860 | 1029 | 8e-110 |
| B9SMU9 Defective in cullin neddylation protein, putative | 952 | 7e-101 |
| B9GVI7 Predicted protein | 930 | 2e-098 |
| B9GMC8 Predicted protein | 920 | 4e-097 |
| B7FLH3 Putative uncharacterized protein | 911 | 4e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G15860.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1); Has 576 Blast hits to 576 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 403; Fungi - 78; Plants - 51; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | 1030 | 4e-112 |
| AT1G15860.2 INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12760.1). | 1030 | 4e-112 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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