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Information for unigene UN13604
| FASTA Sequence |
| Unigene ID: UN13604 | Length: 1265 |
SSR | | GCTTCTCTCCTGAAAAGGAAAATGCGCAAACAGGTGTCAGGACGGCGAAAGATCATGTGTCAATACCCACTGATGGAACTGATGTT
TGGGAAATCAACCTTCAACACTTGAAGTTCGGGCATAAAATAGCATCTGGTTCTTATGGAGATTTGTATAAAGGTACATATTGTAG
CCAGGAAGTCGCTATCAAAGTCCTCAAGCCAGAGCGTCTAGATTCTGAGCTAGAGAAAGAGTTTGCCCAAGAAGTCTTTATTATGA
GGAAAGTGCGACACAAGAACGTCGTTCAGTTCATTGGTGCTTGCACTAAGCCACCACATTTGTGTATTGTTACAGAATTCATGCCG
GGGGGAAGTGTATATGACTATCTACACAAGCAAAAGGGCGTCTTTAAGCTTCCAGCTCTGTTAAAAGTAGCTATAGATATCTGCAA
AGGGATGAACTACTTGCACCAAAATAATATAATTCACAGAGATTTAAAGGCTGCCAACCTTTTAATGGACGAGCATGAGGTAGTTA
AGGTTGCTGACTTTGGAGTGGCTAGAGTAAAAGCACAAACAGGAGTGATGACGGCTGAAACAGGAACATATCGCTGGATGGCTCCG
GAGGTGATAGAACACAAGCCATATGATCACAAGGCAGACGTTTTCAGCTACGGGATTGTGCTATGGGAGCTGTTGACTGGCAAGAT
TCCATATGAATACATGACGCCATTGCAGGCAGCAGTAGGGGTGGTTCAGAAGGGACTACGGCCTACAATCGCTAAGAAGACGCATC
CGAAAATGAGAGAGCTGATGGAGAGATTGTGGGAGAAGGATCCAACGCTGAGACCAGACTTTTCAGAGATAATAGATCAGCTACAA
GAGATATCCAAGGAAGTAGAAGACGAGGAGGAGGAGAAGAAAATATCACCAACGGGAGGAGGAGGTATCTTTGCGGCTCTCAGGAG
AACTGCAACACATCACTAAATACATTGCATTGATCCCACCCACCCAGTACTTGCTTCCAGAAAAGATTGATTTGCAGAGTTTTTGT
GTTGCTTACCTGCTGTTATTCAATTGATTTTGTTTCCTTTCTGTAAGTTATAATACCCCACACACCCACACACACACACACTCATT
GTCCATTTCATCCAACATTTCAAGTTGTTGATGAAAGAAAACTTCATGTACAAGTAAAACTGCAGTGGTTAGAAAAATAAACTCTT
CCTTTAGCTTTTTTTTGGTTGATTGAAAGAAGAAATGTTTAATCTGAATTGGATTGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568041 ACT-like protein tyrosine kinase family protein [Arabidopsis thaliana] | 1510 | 3e-165 |
| XP_002866800 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1507 | 6e-165 |
| XP_002521235 protein kinase, putative [Ricinus communis] | 1337 | 3e-145 |
| CBI37812 unnamed protein product [Vitis vinifera] | 1331 | 2e-144 |
| XP_002280985 PREDICTED: hypothetical protein [Vitis vinifera] | 1331 | 2e-144 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2MHE4 Serine/threonine-protein kinase HT1 | 613 | 1e-062 |
| Q55GU0 Probable serine/threonine-protein kinase DDB_G0267514 | 602 | 2e-061 |
| Q55A09 Probable serine/threonine-protein kinase DDB_G0272254 | 516 | 2e-051 |
| P42686 Tyrosine-protein kinase isoform SRK1 | 448 | 2e-043 |
| Q03526 Tyrosine-protein kinase ITK/TSK | 438 | 2e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S5G6 Protein kinase, putative | 1337 | 2e-145 |
| B9H1M1 Predicted protein | 1272 | 8e-138 |
| B9NFL7 Predicted protein | 1270 | 1e-137 |
| C0PSF3 Putative uncharacterized protein | 1268 | 2e-137 |
| D2KTV1 ACT-domain-containing protein kinase | 1261 | 1e-136 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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