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Information for unigene UN13631
| FASTA Sequence |
| Unigene ID: UN13631 | Length: 1098 |
SSR | | GACCATGTAAGAAGCTTTAATTTCAAAACAAACACAAAAATTACAACAAGGAACAAAAGGGTGGTTTCAAGAAGAAACCAGAAACA
AAGATAAAAAGCAAAAAGCTTCTTCAAAGGATATGATTCAAATTATACAAAGACTACCCCCTAAGAGAAGCTCTAACCACCATTAC
AACACATGTATTCATTCATTCATTCATTCAATCTCCCCAATTCACTAACCCTAAACCCCAATCTTCTTTCACTTCTTCACCTTCCT
CGTCGAAACCCTCTTCGCCGGAGACTTTACAGCCTTCGCCTTCACGCTCTTAGCCGGAGCCTTGGCCTTTGCCTTTTTAGTTACAG
CCGCTGCGGCTTTCTTAGCAGGAGGAGCAGCCTTCTTCTTCCCTGGAGAAGTTCTAGTCGAAGTCCTCGCCGCTTTAGCAGGTCTC
TCTTTAGCCTTAGGCTTAGCAGCAGCAATAGCTTTAGTCTTGGACACAGCAGCCACTGTCTTCGTCTTCGGTTTAGGTTTAGCAGC
GACGACTTTAGCCTTGGGCTTCACAGCTACAGCAGCTTTGGTCTTCTTGGATCCTTTCGCCGCCGGTTTAGCAGCCTTCGGTTTAG
CAACGGTCGCCTTCTTCTTAACCGGAGCAGACGGTTTAGGAGCAGGAGCAGCAACGGCGGTTGATTTAGTAGCGGAGGAGGGGAGC
TTGAAGGAGCCTTTGACTTTGACGAGCTTCCCTGAAGCGACGAGTCTCTTGAGATTGACGAGGAGAAGCTTCCTGAAGGTGGGAGG
AAGCGTCTTCTGCTTCTCCTCTATCAACTTCTGAATCGCGTATTGGCTAGATCCGGTTCTCTCCTTCAACGTCGTGATCGCGTCTT
TAATCATCTCTTCGTAGGTTGGGTGAGAAGAAGAAGAAGATCTCTTCCTCGGAGCTTTCGCAGCAGGCTTCTTCTTCGGAGCTTTA
GCTTCCTTCGTCTTCTTCGCTTTCTTCTCACTCGCCGCCGGTGCAGTCACCGTCTCTTCGACGTTGGTTGGAACGGTTTCTTCCTC
TGCCGACATCTTTCTCTCTCTCTTTATCTTTTCTTTGAAGAAGTTTTATGCGATTGATTGGATTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata] | 696 | 6e-071 |
| NP_172161 histone H1.1 [Arabidopsis thaliana] | 625 | 1e-062 |
| XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata] | 616 | 1e-061 |
| CAA44312 histone H1-1 [Arabidopsis thaliana] | 614 | 2e-061 |
| NP_180620 histone H1.2 [Arabidopsis thaliana] | 613 | 2e-061 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SLS1 Histone H1 | 556 | 7e-055 |
| B9H8I5 Histone H1 | 544 | 2e-053 |
| Q9AT19 Histone H1 (Fragment) | 506 | 4e-049 |
| Q9AT18 Histone H1 (Fragment) | 505 | 5e-049 |
| Q9AT21 Histone H1 (Fragment) | 492 | 2e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G30620.1 histone H1.2 | 774 | 2e-082 |
| AT1G06760.1 histone H1, putative | 626 | 3e-065 |
| AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 249 | 1e-021 |
| AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 190 | 1e-014 |
| AT1G14900.1 HMGA (HIGH MOBILITY GROUP A); DNA binding | 155 | 1e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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