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Information for unigene UN13656
| FASTA Sequence |
| Unigene ID: UN13656 | Length: 1116 |
| SNP | GGGGATAGTCAAAAGACTCAAAACACGAAGAGAGTAAGAGAGACAAGACAAAGAAAACAAAAGGATCCGAAACAGAGTTTAGATCA
GAACTGAAGAGAACTGAACTGTAAGAAGACGAACAAAGATTCGATTTTTTGAGTTGACCATGGAAGACGATAAAAATAACATTCAC
GAACTCGATTTGGAAAAATCAGATCGACCTGTTTGGTTGATGAAGAGTCCTGTAGTTGTCGCCAAGGCCTGGGGAAAGCAAGCTCC
TTCTTCCTCTTCGTTCTCATCCTCCGGATTCAATAGCTTAGGCAAGGTTGTTGAATCCTTTGATCCTCTACAGTCCCAGACCGAGT
TTTTCATGGAGATGGTTGGTGCTGAGTATGGGAACATGCCAAAGAGCTACGCTTTGAACATGTTTAAAGACTTTGTTCCAATGGGT
ATCTTCTCCGAATCCAATCTAGGTGATCCCGCAAGTGAAGGAAAGGTAGAACACAAGTTTGATATGAAGCCTCACGGCGAAGACAT
TGAAGAGTACGCAAAGCTTTGTCGAGAGAGAACAAGCAAATCCATGGTTAAAAGTAGACAGATACAGGTTATTGATAACGACCGTG
GCGTACATATGAGGCCTATGCCTGGAATGCTTGGTTTAGTTTCCTCCAATTCAAAGGAGAAGAAGAAACCTGCACCAGTCAAGCAA
ACAGAGGTGAAGAGGACGAGGAGAGATCGTGGGGAGCTCGAGGCTATAATGTTCAAGCTATTCGAAGGCCAACCAAACTGGACTTT
GAAGCAGCTGGTACAGGAGACGGATCAACCAGCTCAGTTTTTGAAAGAGATACTGAACGAGCTGTGCGTGTACAACAAGAGAGGTT
CGAACCAAGGGACGTATGAGCTTAAACCAGAATACAAGAAAGCTGGCGAAGATGATGATACAGGAGAGCAGTGAAATGTAATCCCA
TGTGTTGTAGCACACAATTGATTACTATACTACATGTTTCATTTGTCATAATGTTATAACCACGGATTCATTTTGATCAAAGGAAC
TTTGGCGAGAGAAGAGGGGTTACATTTTAATTTGTATTATTGAAAGGAAAATATGGAAGTTATGAAAGTGTTTGTTTTTCTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889029 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1066 | 7e-114 |
| NP_177683 transcription initiation factor TFIIF beta subunit [Arabidopsis thaliana] | 1043 | 3e-111 |
| BAJ53176 JHL18I08.10 [Jatropha curcas] | 937 | 6e-099 |
| XP_002510468 Transcription initiation factor IIF subunit beta, putative [Ricinus communis] | 934 | 1e-098 |
| XP_002307692 predicted protein [Populus trichocarpa] | 931 | 3e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O94424 Transcription initiation factor IIF subunit beta | 214 | 2e-016 |
| Q54KT7 General transcription factor IIF subunit 2 | 180 | 2e-012 |
| Q03123 General transcription factor IIF subunit 2 | 171 | 2e-011 |
| Q01750 General transcription factor IIF subunit 2 | 162 | 2e-010 |
| Q8R0A0 General transcription factor IIF subunit 2 | 160 | 4e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LQZ4 At1g75700 | 1043 | 2e-111 |
| B9R825 Transcription initiation factor IIF subunit beta, putative | 934 | 1e-098 |
| A9P7Y3 Predicted protein | 931 | 2e-098 |
| B9GRH3 Predicted protein | 929 | 4e-098 |
| C6TL77 Putative uncharacterized protein | 904 | 3e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G75510.1 transcription initiation factor IIF beta subunit (TFIIF-beta) family protein | 1043 | 1e-113 |
| AT3G52270.1 ATP binding / RNA polymerase II transcription factor | 519 | 7e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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