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Information for unigene UN13664

FASTA Sequence
Unigene ID: UN13664Length: 766 SSR 
GGATCTAATCCCACCGCATATTCTCTCTCTCTCAAAAAAAGCTAAAATGTGGCGATTCTCTGTTTCGACGCTGCTCTTCTCGTATC
TGGCCGTTACTTTCCTGTCCATCTCTTCATCTTCCTTGGGTGATTCGGAGGCGACATGTTCTGGAATAGTCCCGTTGCCGAACCGG
AACGATAAGATATCGATATAACAGAGTTTGGCGGCGTGGGAGACGGCAGGACGGTGAACACGAACGCCTTTTAGGAAGCGATTTAT
AGAATACAGCACCTTAAGAGGAGAGGAGGCACGCTCCTGTACATACCTCCGGGAGTTTTTCTCACGGAGAGCTTCAATCTCACCAG
CCATATGACTCTCTTCTTGGCTAAAGGCGCTGTCCTTAAAGCTGTTCAGGATACAGGGAACTGGCCATTGATTGATCCTTTGCCAT
CTTATGGAAGAGGGAGGGAGTTACCAGGGGCACGGTATATGAGTTTTATTCATGGCGATGGCCTTCGTGATGTAGTCATCACTGGA
GAAAACGGGACAATAGACGGTCAAGGAGAAGTGTGGTGGAACATGTGGCGCAGTAGAACTCTAAAGTTCACTAGACCGAATCTAAT
CGAGCTCAAAAACTCTAAGGAGATCATAATTTCCAATGTTGTTTTCCAGGATTCACCCTTCTGGAACATTCATCCTGTGTATTGCA
GGTATATATTGTGAAGTTTGGAGGAAACCAAAGTAGTGTAATAGTTTCTCTCATTTTATTAACTTAGCCAATAGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194113 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana]8325e-087
ACC91250 glycoside hydrolase family 28 protein [Arabidopsis halleri]8272e-086
XP_002867688 glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp. lyrata]8253e-086
CBI34471 unnamed protein product [Vitis vinifera]7797e-081
XP_002304552 predicted protein [Populus trichocarpa]7691e-079

Swiss-Prot top hits (Blast detail)Scoree value
A7PZL3 Probable polygalacturonase5033e-050

TrEMBL top hits (Blast detail)Scoree value
Q9SUP5 Putative polygalacturonase8324e-087
B2WS78 Glycoside hydrolase family 28 protein8271e-086
B9GXH4 Predicted protein7697e-080
B9RCR5 Polygalacturonase, putative7689e-080
Q6EN36 Os02g0256100 protein7015e-072

Arabidopsis top hits (Blast detail)Scoree value
AT4G23820.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein8322e-089
AT5G41870.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein6557e-069
AT3G62110.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein5581e-057
AT4G33440.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein5562e-057
AT3G16850.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein5302e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  50%
 
82  50%

Unigene MembersMember information