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Information for unigene UN13669

FASTA Sequence
Unigene ID: UN13669Length: 957 SSRSNP
ACAGAGCAGCAACAGCTTTACAAGCGAGAAGAGAAGGGAAGAAGAAAACAAACACCGACTTTACTTAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGATAGCCGAGATCCATCCGTGAATCGTTGATTTCATCTCTAGTCCGAGTTTCGATGACTTCCCGTAGAAGAAC
TCTCCTCAAAGTCATCATCCTCGGCGATAGCGGGGTGGGGAAGACCTCTTTGATGAATCAATATGTTAATAAGAAGTTTAGCAACC
AGTACAAGGCCACCATTGGTGCCGATTTCTTGACTAAGGAAGTACACTATGAAGACCGCCTTTTCACTTTACAGATATGGGACACC
GCTGGTCAGGAAAGGTTCCAGAGCCTTGGGGTAGCTTTTTATCGCGGTGCTGATTGCTGTGTACTTGTCTATGATGTCAACTCCGC
CAAATCATTTGAGGATCTCAATAACTGGAGGGAAGAGTTTCTGATTCAGGCGAGCCCATCTGATCCAGAGAACTTCCCTTTTGTTG
TCATCGGTAACAAAATCGATGTAGATGGTGGAAACAGCCGTGTGGTTTCAGAGAAGAAGGCTCGAGCTTGGTGTGCTTCAAAAGGA
AACATCCCCTACTATGAAACTTCTGCTAAAGAAGGCACCAATGTTGAAGACGCATTCTTGTGTATTACCAAGAATGCAATGAAGAG
TGGAGAAGAGGATGAAATGTACTTGCCGGACACAATCGATGTCGGAACCAGCAATCCACAGAGGTCAGCAGGATGTGAATGCTAAA
AGGATTCTTTTACCTTTGCTCTCTGACCACCAGTTTATCTCATTCTCCGAGGTTTTTTACCTTCTTGTAAATCTGTTGTTCTGTGG
TAAATTATTCAAAATAAAAAAATAAACCCATAACGTTGTTTATCGCCGTTGTTGTTGTCTATCACATTTATGAAAAGACTCAATGG
TCTTGTAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175355 RAB GTPase homolog G3E [Arabidopsis thaliana]10433e-111
XP_002883153 hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp. lyrata]10111e-107
ABB02623 unknown [Solanum tuberosum]9951e-105
XP_002313053 predicted protein [Populus trichocarpa]9941e-105
NP_188512 Ras-related protein Rab-7A [Arabidopsis thaliana]9922e-105

Swiss-Prot top hits (Blast detail)Scoree value
P31022 Ras-related protein Rab79722e-104
Q40787 Ras-related protein Rab79462e-101
O24461 Ras-related protein Rab79391e-100
Q9XER8 Ras-related protein Rab79239e-099
P93267 Ras-related protein Rab7A9013e-096

TrEMBL top hits (Blast detail)Scoree value
Q9XI98 At1g4930010432e-111
Q38JI9 Putative uncharacterized protein9957e-106
A9PE06 Predicted protein9949e-106
Q9LS94 AtRab719921e-105
Q6UNT4 Putative GTP-binding protein9902e-105

Arabidopsis top hits (Blast detail)Scoree value
AT1G49300.1 RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding10448e-114
AT1G49300.2 RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding10448e-114
AT3G18820.1 ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding9936e-108
AT1G52280.1 AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding9192e-099
AT3G16100.1 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C); GTP binding9068e-098

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  38%
 
82  25%
 
101  13%
 
92  25%

Unigene MembersMember information