Information for unigene UN13675
| FASTA Sequence |
| Unigene ID: UN13675 | Length: 843 |
SSR | | GGACTCCTCTCCGCCGTCTCTACACTCTCTCTCTCTCACTTATCATCATCACACACACTCTCTGCTTCACAAGAAGAGCTTTCTGA
TTCGTCTCTGTTGTTTCTGCTTCTGGTTGATACTTTCAGCTTAAGCTCCAAGTCGATCAATATGTCAATGACGGAAGAGAGTAAGA
CGACGAAGCTCGAATCGGCGGGAGACTCTTCGGATGTCGAGAACGGGAACTGTAGCAGTAGCGGAGGAGGAGGAGGAGGCGATACT
AAGAAGACTTGCGTTGATTGCGGAACGAACAAGACTCCTCTCTGGCGTGGTGGCCCTGCTGGTCCTAAATCATTGTGCAATGCGTG
TGGGATCAAGAGCAGGAAGAAGAGACAAGCAGCTCTTGGGATTAAACAAGAGGATAATAAGATGAAGAACAACAAAAGTAACGATA
GCTGTCTCGCTCCCGACAATCAGACCGTCAAAAACGGAAAAGGCGATTCAGGAAGCGTCAAGAACAAGATCAAGAAGACGGAGAGT
GAGGATTGTAATGACAAGAAGAGTGTGAAAAGGGGTGGTAGATTTTTGGATTTGGGATTTAAAGTGCCGGTGATGAAGAGATCGGT
GGTGGAGAAGAAGAGGGTATGGATGAAGCTGGGTGAAGAGGAACGAGCAGCAGTGCTTCTCATGGCTCTTTCTTGTGGTTGAGCTT
TTTTTTGTCTCAACTCCTTTTTTTTGGTCGGAATGGTTTAGGAGAAGAGATTAGGGCAAATAAAGAAATGATGAATTTTTATGTGT
AATCCTGTCTGAAGGCTAAAGCTAATGTTATGCTACTTACTAATTAATTAAATTAATCGTTTTCACTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868160 hypothetical protein ARALYDRAFT_329901 [Arabidopsis lyrata subsp. lyrata] | 689 | 2e-070 |
| NP_188312 GATA transcription factor 17 [Arabidopsis thaliana] | 540 | 4e-053 |
| NP_680707 GATA type zinc finger transcription factor family protein [Arabidopsis thaliana] | 443 | 8e-042 |
| XP_002885174 hypothetical protein ARALYDRAFT_479155 [Arabidopsis lyrata subsp. lyrata] | 382 | 9e-035 |
| XP_002275498 PREDICTED: hypothetical protein [Vitis vinifera] | 239 | 4e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LIB5 GATA transcription factor 17 | 540 | 2e-054 |
| Q8LG10 GATA transcription factor 15 | 227 | 4e-018 |
| Q9FJ10 GATA transcription factor 16 | 212 | 2e-016 |
| Q8LC79 GATA transcription factor 18 | 181 | 9e-013 |
| Q9SZI6 Putative GATA transcription factor 22 | 179 | 1e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WPA1 Putative uncharacterized protein At3g16870 | 540 | 3e-053 |
| Q8GW81 Putative uncharacterized protein At4g16141 | 443 | 5e-042 |
| C6T5X2 Putative uncharacterized protein | 235 | 7e-018 |
| B9RZK8 GATA transcription factor, putative | 232 | 2e-017 |
| B9N4N6 Predicted protein | 228 | 5e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G16870.1 zinc finger (GATA type) family protein | 540 | 2e-055 |
| AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding | 452 | 3e-045 |
| AT3G06740.1 zinc finger (GATA type) family protein | 227 | 4e-019 |
| AT5G49300.1 zinc finger (GATA type) family protein | 212 | 2e-017 |
| AT3G50870.1 MNP (MONOPOLE); transcription factor | 181 | 8e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
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For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
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