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Information for unigene UN13682
| FASTA Sequence |
| Unigene ID: UN13682 | Length: 1131 |
| SNP | GGACCTTCCTCAAAGCCCAATCAGTCGTCATCCATTATCTTTTCTAAAAAACAAAATGGCGATTGCTTTCAAATCCGGCGTCTGCT
TCCTCAACTCCCCAAAACCCCAAATCGGAATCCGCCACTCTTCTCCCGACTCCTCCCTCTCTTTCAAGAGATTAACTCCCATCGCC
GCCCTCTCCACCTCTTCTCCCACCCTCGGTCTCGCCGATACGTTCACCCAGCTCAAAAAACAGGGCAAAGTAGCATTCATACCGTA
CATCACAGCTGGTGACCCAGATCTCTCTACTACTGCTGAAGCATTGAAAGTTCTTGACGCTTGTGGTTCCGACATTATCGAACTGG
GTGTTCCTTACTCCGACCCTTTAGCCGATGGACCTGTTATTCAGGCTGCGGCGACAAGGTCTTTGGAGAAAGGAACCAACCTTGAT
AACATACTTGACATGTTGGATAAGGTTCTTCCAGAGTTATCGTGTCCTGTTTCGCTGTTTACTTATTACAACCCGATTCTCAAACG
TGGGTTGGGGAAGTTCATGTCCAGTATAAGAGATGTTGGTGTACAGGGGCTTGTGGTTCCTGATGTTCCTCTTGAGGAAACTGAGT
TGCTGAGAGAAGGAGCACTTAGCAACGGCATTGAACTGGTCCTACTCACGACACCAACCACACCAACAGAGAGGATGAAGCGAATT
GTTGAAGCATCAGAAGGGTTTATTTACCTTGTGAGCTCAATAGGAGTGACCGGTGCACGTTCATCTGTCAGCGGAAAGGTTGAGTC
GCTCTTGAAGGATATCAAAGAGGCAACAGACAAGCCAGTGGCGGTTGGTTTTGGAATATCAAAGCCTGAGCATGTGAAACAGATAG
CTGGTTGGGGAGCTGATGGAGTGATCGTAGGAAGTGCAATGGTGAGGCTTTTGGGAGATGCCAAGTCACCAACTGAAGGGCTCAAG
GAGCTTGAGCGTCTCACAAAGTCTCTCAAATCTGCTCTTCTTTGAAAACACAAAGAAAAAAATAACATTTGCAGACCGCTTCATTG
ATTGTGTTTTATTTTACTTCAGTAATGTATGAAAATGATGTTCCAAACTGTTGAGACATTTCAAGTATAATGATAATTAAAAACTT
TCGGTTTGATTTC
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| GenBank top hits (Blast detail) | Score | e value |
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| CAH56477 tryptophan synthase, alpha subunit (TSA1) [Isatis tinctoria] | 1451 | 2e-158 |
| AAM65526 tryptophan synthase alpha chain [Arabidopsis thaliana] | 1432 | 3e-156 |
| XP_002877992 alpha subunit of tryptophan synthase [Arabidopsis lyrata subsp. lyrata] | 1426 | 1e-155 |
| NP_567004 tryptophan synthase alpha chain [Arabidopsis thaliana] | 1425 | 2e-155 |
| BAE98558 tryptophan synthase alpha chain [Arabidopsis thaliana] | 1417 | 1e-154 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B0C6F8 Tryptophan synthase alpha chain | 775 | 2e-081 |
| B0JXU3 Tryptophan synthase alpha chain | 765 | 3e-080 |
| Q8KX32 Tryptophan synthase alpha chain | 762 | 6e-080 |
| B7JUK2 Tryptophan synthase alpha chain | 759 | 1e-079 |
| P77960 Tryptophan synthase alpha chain | 759 | 1e-079 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q659I8 Tryptophan synthase, alpha subunit (TSA1) | 1451 | 1e-158 |
| Q8LA83 Tryptophan synthase alpha chain | 1432 | 2e-156 |
| Q42529 At3g54640 | 1425 | 1e-155 |
| Q0WWE0 Tryptophan synthase alpha chain | 1417 | 1e-154 |
| B9S4R8 Trytophan synthase alpha subunit, putative | 1143 | 6e-123 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G54640.1 TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN); tryptophan synthase | 1426 | 5e-158 |
| AT4G02610.1 tryptophan synthase, alpha subunit, putative | 1034 | 1e-112 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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