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Information for unigene UN13687

FASTA Sequence
Unigene ID: UN13687Length: 2181 SSR 
GAAGTGTAACACAGATAATATCATAATAATACCATTGAGGTAACAGAGTACAAAGTTACAACAGAAAGGCCAAACTCCAGAAGATG
AACTTCTAAGAGTTTTGCATTATGAACGTTTTTACATATATAAGTTATAGCATAAATAAATAAAATAGAAATACAGAGAAGTCCAC
ATAATTTGGAAATATACAGTATTTTGATGAATTAACACACTTTTATTATTTGGTTTTCTTCATCCAAAGGAGTTGTTGAGTAATAC
AAGATGATAGCAATGCTTACACCAGAGTTTCCCCTTCATCAGGGATTAGTAGCATTGGTATTTGACCACGGTCAACGAAGTCAATC
TGGCTCAGCCTCAGACAACACAAGACTTGTTCCGGCAGCTCTTCTGGTTTTTGAGCCTGGATGGCTAAACCGAGATCAAGAATTCC
ATTCTTCAGTCGATCTCTGAATGCTTCAAGTCCTTTCCTTGATATGTAGCTGAACCGATGGACATCCAAATCAATCTCAAAGTAGT
TTGGACCCTTAAAGAAGTTGTGTTGAGGACGAGAAAGGACAGGCTTTTCATTGTAAGCCTGTACAAGCTTCTTTTCAGTCGAGCCT
AGAGCTAGATCTTCGGGGTTAACAAGTCCAGCCACGATCTTAAGCCTTTCACGGAAAGCAACAGTGCTGTCTTTCGCAAACCCTTT
CACCTTCTCCGTCTCATCATCCACAAGTTTCTTGATGCTGTCCTGATACTGCTGAGAGGTTTCTTTTTCGAAATTTTCTTGTAATT
TAAAGTAAAGTACAATGCTCATGCCTTCCCCATCACTATCTCCAAGGAACATTGCAGCAGGATAGGTTGGTAACTGAATGTTGACA
ACGAGAAGAGCAGGGAGCTTTGCCTCGGTTTTGATGTTTGGAAGCTCGATGTGTTGGGCGATATGATCAATCTTCTTAGGACAGAC
AAACAAATCAACGCCAATAGGAGTGTAAGCACATTGATTCGGAGCTGGGGATTTCTTTTTGTCTTTGAAATAGGTTTCTCCACGGA
GTTTAAAAGTTGAAGGTGGTATCTCACACCAGCTTCCACTGGACTGCTTCTCTCTGGCAGAGCAAGGAATGGTGAATCCTGCTTTA
GGACGGTACAGCAACTTACGCTGCTCCGTAACTTCCTCACCATCGCATGATCTCCTCTTGAAAGAAAGCCGGTAAGCCGCAGACTT
TCGCTTCTGAGATGAGGGCGAGTTTAGAGTCTTGTCGTTGAAACTAACCGTTGGCATCAACCTGCTCAGGCTGGATTTCAGGGTTT
TCTCCTGAGAGCTCCGTTTCTGATCCTTCAAGCCTTTGAAGCTTGCATGGTTCAATAGGTTCTTCTTGTTGTTTCCAGCGATAACA
GAGAGACCACCACTAGGATCCTTGTACACGCCTTTGCCCACGAACTTCTCGGGTTTACTCTTGTCTATCTTCAAGTAACTCTCATG
GTACTCTTCGTACTTCCCTTTCCCATCCACAATGCAGGAAGAAGATTCAAACTGAACTACTTGACCATTTGGGATGTTACCGGTCG
CACCTCTCGGTGATGATACGTTATCTTCAGGTAGGCTGACGAAGTCCTCATCCTCATCAGAATCAAGAACACTGACAGAGTCAAAC
CATGCATCATCTTGCGAGGTAGCTGCAAAAGAAACTCGGCTGCCAACGTCACTGAGCCTTCTAACATTTGAATGAGGAACGATGTC
AGATACTTTAGAGAAGTGTTTGGAAGACCTGCGACGGCCTTTACGGCGAGGCCGCCTAATCCCTCTTGAATGGGTTGACACACATC
CACCCATTGTTTTATATAATTTTCTTTAGATCCTGAAAAAAGGAAACATGATAAAGGGGGGGGATCTCCTTTTGTTGTTGTTGTTG
TTTTTTTTTTAATCTGTAGATAAAAAAGGGGAAGAATCTTCCCGTAAGTAAGTAGCAGAGATTCTAATAATCTCAGAAGAAGAAGA
ACCCAGGAAGGGAAGGGAAAGGAAGATAAGGCGAATTAGATTTAAAACCCGAAGATATCGGATCCGGGCACGGGCACCAATGACAC
AAAAAAGAAAAAAAAAAATCTTCCCTTTTGGCCTTCCCTTGTCCTCTCTCAACACTAGTTTCTCTCTAAAGGAAGAGAGAGCACAG
GAAAGAGAGATTGCTTTTGGGCTTAAATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875495 predicted protein [Arabidopsis lyrata subsp. lyrata]23548e-263
NP_566845 uncharacterized protein [Arabidopsis thaliana]23412e-261
AAK96752 Unknown protein [Arabidopsis thaliana]23412e-261
XP_002868719 predicted protein [Arabidopsis lyrata subsp. lyrata]20421e-226
NP_198759 uncharacterized protein [Arabidopsis thaliana]19586e-217

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93XY8 Putative uncharacterized protein At3g29180; MUO22.223412e-261
Q9LI95 AT3G29180 protein23412e-261
Q9ZR99 Gb|AAD00543.119584e-217
B9SVK3 Putative uncharacterized protein16082e-176
B9IK20 Predicted protein (Fragment)13213e-143

Arabidopsis top hits (Blast detail)Scoree value
AT3G29180.1 unknown protein23427e-264
AT5G39430.1 unknown protein19628e-220
AT1G13970.1 unknown protein10488e-114
AT1G59650.1 CW148929e-096
AT1G10410.1 INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: CW14 (TAIR:AT1G59650.1); Has 144 Blast hits to 144 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).8892e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  23%
 
66  46%
 
71  8%
 
101  8%
 
122  15%

Unigene MembersMember information