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Information for unigene UN13706

FASTA Sequence
Unigene ID: UN13706Length: 1455 SSR 
GGACTGAAAACGGCGTCGTTGAGCTTGGTTCGTTGGAGGTTATACATCAAAGCTCGGATCTTGTTGATAAAGTCAACGGCTTTTTC
AGTTTCAACGGTGGAGGTGGAGGCGAGTCGGGTTCTTGGGCAGCGTTTAATTTGAACCCGGATCAAGGAGAGAATGATCCCGCTAC
TACGTGGATTAACGAACCGGATGTAACCGGAATCGAACCGGTTCTTGGGGTGAACACCGGTAATAATAATAACTCGACTTCTTCTA
ACTCTGATTCTCAGACAGCTTCCAAGCTTTGTAATGGAAGCTCGGTGGAACACCCTAAGCAGCAGCAGCAGCAGCAGAACCCACAG
ATCTCTAGTTCTGGGTTTGTGGAGGGAGGAGACAGCAAGAAGAGGAAGAGATGTTTGGTTTCAGACAAGGAAGAGGAGATGCTGTC
TTTCACTTCTGTTCTTCCACTTGCTACTAAAACAAACGATTCGGATCACTCTGATCTCGAAGCTTCGGTTGCTAAAGGACCAGAGA
GTGGTGGTAGAACCGTGGTTGAACCGGAGAAGAAACCGAGAAAACGAGGGAGAAAACCGGCGAACGGAAGAGAGGAGCCGTTGAAT
CATGTGGAGGCAGAGAGGCAGAGAAGGGAGAAGCTGAACCAGAGATTCTACTCTCTGAGAGCTGTGGTTCCTAATGTCTCTAAGAT
GGATAAGGCTTCGCTTCTAGGGGACGCGATTTCGTATATCAATGAGCTTAAAGCTAAGCTGGAGAAGGCTGAGTCTGATAAAGAAG
AGTTGCAGAAGAAGATCGATGGGATGAGCCAAGAGGTGGCGAGTGGGAATGTGAAAAGTTCGGTTAAAGATCAGAAGTGTGTGGAT
CAAGATTCAGGTGTGTCGGTGGAGGTGGAGATCGATGTGAAGATCATTGGTTGGGATGCGATGATTAGGATCCGATGCGGTAAGAA
GAATCATCCTGGTGCTAAGTTCATGGAAGCACTCAGGGAATTGGAATTGGAAGTGAGTCATGCGAGTTTATCGGTAGTTAATGAGT
TCATGATCCAGCAAGCGACTGTGAAGATGGGGAATCAGTTTTTCACGCAGGATAAGCTCAAGGCTGCTCTAATGGAGAGAGTATGA
GAAGGCACATGTAAGATAAGTTAGCATCTCTAGAGGGTAATAAACCGAAGAAACAATGCTAAAACAAGGGTCACAGTATGAACCAG
TAAAAATCTCATGTGATTGTAGTGTAAAATGTATTGTGCAAAGGGTAATTTTGCAGCAGAGCACCCAAGTTGTTATTTGATGCTTT
GTTAGAGAAGTTTTAGTTTGATGGTAAGTAGTTTGGGCTGTAAGCTTTTCATGAGATTAAGTGTCTTCGGTTTGTTTGGTGCATTG
AGTGGGTATGTACATATTATATTATTATGTAATGAAATAAGGTTTTTATTTGTAATGAATAAAATCAAAATGGGATTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193522 transcription factor MYC4 [Arabidopsis thaliana]12765e-138
AAL55711 putative transcription factor BHLH4 [Arabidopsis thaliana]12765e-138
ABD65632 basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea]12613e-136
XP_002868032 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]12594e-136
NP_199488 transcription factor ATR2 [Arabidopsis thaliana]10678e-114

Swiss-Prot top hits (Blast detail)Scoree value
O49687 Transcription factor MYC412762e-139
Q9FIP9 Transcription factor ATR210673e-115
Q39204 Transcription factor MYC26159e-063
Q9LUK7 Transcription factor bHLH284931e-048
O23090 Transcription factor bHLH143442e-031

TrEMBL top hits (Blast detail)Scoree value
Q25BJ5 Basic helix-loop-helix (BHLH) family transcription factor12612e-136
B9S1E9 Transcription factor AtMYC2, putative7612e-078
B9MU24 Predicted protein7477e-077
B9N2M7 Predicted protein7451e-076
C6FHY2 BHLH domain protein7442e-076

Arabidopsis top hits (Blast detail)Scoree value
AT4G17880.1 basic helix-loop-helix (bHLH) family protein12762e-140
AT5G46760.1 basic helix-loop-helix (bHLH) family protein10673e-116
AT1G32640.1 MYC2; DNA binding / transcription activator/ transcription factor6158e-064
AT5G46830.1 basic helix-loop-helix (bHLH) family protein4931e-049
AT4G00870.1 basic helix-loop-helix (bHLH) family protein3442e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  40%
 
102  40%
 
61  20%

Unigene MembersMember information