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Information for unigene UN13720
| FASTA Sequence |
| Unigene ID: UN13720 | Length: 1286 |
SSR | | GGGAGAGGAAGGAAGGACAGAGAAGGGGAAGAGTCAAAAGAAAGATAGAACGATTTGGGTGTTTTCTCTCACAACTAAGCTAAACC
CACCACCAACCCTTTTTGGGAGATTCTAGTGGAGAGAAAGAAGCTTGAATCTTCTCTCTAAGAAAAAAAAAAAAAGGGAAAAAGAA
GGAATAGAATCTAGAAAATCGGAAATGTCGAGCTCAGTATCCACTTCGTTGTGCTGTTCGTCAACCCAGGTCAATGGGTTCGGTCT
TAGGCCTCAAAGGTCGCTCCTTTACCAACCCACTTCCTTTTCTTCTTTCTCCAGAAGGAGAACTCATGATGGTGTTGTGAAGGCCA
CAGCTCGTGTTGATAAGTATTCCAAGAGTGATATCATCGTCTCTCCCTCCATTCTCTCTGCTAATTTCGCCAAACTAGGCGAGCAG
GTAAAAGCAGTAGAGTGTGCAGGTTGTGATTGGATCCATGTTGATGTGATGGATGGTCGTTTTGTTCCCAACATCACTATTGGACC
TCTTGTGGTTGATGCTTTGCGTCCTGTTACTGATCTTCCTCTGGATGTTCATCTTATGATAGTGGAACCAGATCTGAGGGTACCAG
ATTTCATCAAAGCAGGTGCAGACATCGTCAGTGTACACTGTGAGCAGTCATCCACCATCCATTTGCACCGCACTGTCAATCAAATC
AAAAGCTTAGGTGCTAAAGCTGGAGTTGTTCTAAACCCTGGAACCCCATTGAGTGCTATAGAATATGTATTGGAGGTGGTGGATCT
GGTCTTGATAATGTCGGTCAACCCTGGGTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTTAAGAAAATCTCGGATTTGAGAAGAA
TGTGTGTCGAAAAGGGAGTAAACCCATGGATTGAAGTTGATGGTGGTGTCACTCCAAAGAATGCATACAAGGTTATTGAGGCTGGA
GCAAATGCTCTAGTAGCCGGATCAGCTGTATTTGGAGCTAAAGACTATGAAGAAGCTATTAAAGGAATCAAGACCAGCAAGAAGCC
AGAAGCTGTGGCTGTGTAATGTGAAGCAACAAGCTAAAAAGATCATAAGACAGATCACCGAGATGTTTATGTTGTTGTTGTTGTCA
TTCACCAGATTGCATTCGACATAAAAAAATCCATAAGAATCAAACTCTCAATAGTTTTGAAGTAGCTCGTTTATACTCCTGTGTAT
CATCATTGTCTTGTAGATTTGGGGATATGCAGATTCAATACATTATGCAATTAATAAGAAATAAGCTGAGTGTTACATATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200949 D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana] | 1298 | 1e-140 |
| XP_002866432 hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp. lyrata] | 1298 | 1e-140 |
| XP_002330128 predicted protein [Populus trichocarpa] | 1223 | 5e-132 |
| XP_002284772 PREDICTED: hypothetical protein [Vitis vinifera] | 1184 | 2e-127 |
| AAM19354 ribulose-5-phosphate-3-epimerase [Pisum sativum] | 1179 | 7e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q43157 Ribulose-phosphate 3-epimerase, chloroplastic | 1159 | 6e-126 |
| Q43843 Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) | 1139 | 1e-123 |
| Q9ZTP5 Ribulose-phosphate 3-epimerase, chloroplastic | 1097 | 1e-118 |
| P74061 Ribulose-phosphate 3-epimerase | 798 | 4e-084 |
| O34557 Ribulose-phosphate 3-epimerase | 662 | 3e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SAU2 Putative ribulose-5-phosphate-3-epimerase | 1298 | 8e-141 |
| B9N4C5 Predicted protein | 1223 | 4e-132 |
| Q8S4X2 Ribulose-5-phosphate-3-epimerase | 1179 | 5e-127 |
| C6TMB6 Putative uncharacterized protein | 1152 | 6e-124 |
| A5AF07 Putative uncharacterized protein | 1123 | 1e-120 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61410.1 RPE; catalytic/ ribulose-phosphate 3-epimerase | 1302 | 1e-143 |
| AT5G61410.2 RPE; catalytic/ ribulose-phosphate 3-epimerase | 1302 | 1e-143 |
| AT3G01850.1 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 397 | 1e-038 |
| AT3G01850.2 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 397 | 1e-038 |
| AT1G63290.1 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 387 | 2e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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