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Information for unigene UN13726

FASTA Sequence
Unigene ID: UN13726Length: 769 SSRSNP
GGGAGCTTCTTCTTCTGGATCGTCTCTCTTCTGGTGCGATCTATCTATCTCTCTCTCTCTAACTGCGCGGGGGCGGGTGTGAAACT
TTTGGCGGGAAAATGTCGGGGAAAGGAGCGAAAGGATTGATAATGGGGAAACCTAGCGGTAGCGACAAGGACAAGGACAAGAAGAA
ACAACCCATCACCCGCTCTGCTCGAGCTGGTCTTCAGTTCCCAGTAGGTAGGGTGCATCGACTATTGAAGACAAGGTCCACTGCTC
ACGGAAGGGTTGGTGCAACCGCAGCGGTTTACACAGCAGCCATACTCGAGTATCTGACCGCAGAAGTTTTGGAGTTGGCTGGTAAC
GCCAGCAAGGATCTCAAGGTGAAACGTATCTCCCCAAGGCACTTGCAGCTTGCCATCCGTGGAGATGAGGAGCTTGATACCCTCAT
CAAAGGTACTATTGCTGGTGGTGGTGTCATCCCTCACATCCACAAGTCTCTCATCAACAAATCCGCCAAGGAATAGATTTCTTCTT
GCTTTTGCTTCTCATGTTTCTTTCTTTTTAAGTATTACGAGAGTCTGTGTGTGTGTGTTTGATCAAGACGCTAGAGAGAGCCTCTT
TTGTTAGGAATCTCGTTTGTTATTCTTCCATCAGCCTGCCTCTACTTTGATTCCTGTCGAGTTATCTATCTTTAATGCATATGTAT
TCAGTGATTATCTAAACACCCATATTTCTGACTACCTTCTGGTTTGTTTGTTTCAAAATAACATATCATCCCCTTACATAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175683 histone H2A protein 9 [Arabidopsis thaliana]6481e-065
XP_002885097 hypothetical protein ARALYDRAFT_341690 [Arabidopsis lyrata subsp. lyrata]6183e-062
XP_002529367 histone h2a, putative [Ricinus communis]5987e-060
ACU14550 unknown [Glycine max]5915e-059
XP_002285266 PREDICTED: hypothetical protein [Vitis vinifera]5906e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9C944 Probable histone H2A variant 36485e-067
O23628 Histone H2A variant 15742e-058
Q8H7Y8 Probable histone H2A variant 15733e-058
Q8S857 Probable histone H2A variant 25616e-057
Q84MP7 Probable histone H2A variant 35392e-054

TrEMBL top hits (Blast detail)Scoree value
B9STP8 Histone H2A5985e-060
C6SZ77 Histone H2A5913e-059
A5AKG7 Histone H2A5904e-059
C6SYX1 Histone H2A5895e-059
A9NMZ1 Histone H2A5842e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G52740.1 HTA9 (HISTONE H2A PROTEIN 9); DNA binding6541e-068
AT3G54560.1 HTA11; DNA binding5751e-059
AT2G38810.1 HTA8 (HISTONE H2A 8); DNA binding5331e-054
AT2G38810.3 HTA8 (HISTONE H2A 8); DNA binding5331e-054
AT2G38810.2 HTA8 (HISTONE H2A 8); DNA binding5331e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  31%
 
121  6%
 
72  13%
 
104  25%
 
204  25%

Unigene MembersMember information