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Information for unigene UN13743
| FASTA Sequence |
| Unigene ID: UN13743 | Length: 1595 |
| SNP | GGGCAGTCTATAGGTTTTAAAGCAGCTCAGCTCCGTCAATCTCCTCCTCCCTCCTCCTAATCTCTTCCACTCCCTCCTCCTAAAGC
AGAGCATCAAATGGCGCTTACCTTCTCAGATCTACACACAGAGCAGGGTGTCAAATCCGTGGAGGAGCACCTCGCCGGAAAAACCT
ACATCTCCGGAGATCAGTTGTCTGTGGATGATGTGAAGGTATACGCTGCCGTTTCGGGGAAACCCAGCGATGCTTTCCCCAATGCT
AGCAGGTGGTACGATTGCGTCGCTTCCCACCTTGCTAAAAGCTTCCCTGGAAAAGCCGTTGGAGTGAGTATCGGTGGCTCTGCTGC
TGCTCCTCCTGCTCAAGCTGAGGCACCTGCATCAGCTGTAGCTGAGGATGATGATGATGACATGGATCTGTTCGGTGATGAGACCG
AGGAGGAAAAGAAAGCTGCAGAGGAGAGGGAGGCTACTAAGAAGGACACCAAGAAGCCTAAAGAGAGTGGAAAGTCCTCTGTGCTC
ATGGAAGTGAAGCCATGGGATGACGAGACAGATATGAAGAAACTTGAGGAGTGCGTTCGTGCTGTTGAGATGCCTGGTCTTCTATG
GGGAGCTTCAAAATTGGTTCCAGTTGGTTACGGTATCAAGAAGCTCACGATCATGCTCACAATTGTTGATGACCTCGTCTCCCCTG
ACAACCTCATTGAAGACTATCTCACCAGTGAACCTAACAACGAGTACATCCAGAGTGTTGACATCGTTGCATTCAACAAGATCTAA
GAGACTTTAAAACCTCTCCCTACCCCCACAAACAATACATTTGATTTCTTTCCAAGTTTTTTTTATTTTTCTGCTGTTTGCTTGTT
TTCTAGTTGCAAGGGCTCTTTCATGTTACTAGAAACATAAACTATCAATACTATTTTATTTCTTTACATTGTCTTAAGAGACACTC
AAGTACCGTGAAAAGTTCTCTACAACTTCAGAAACAATCACGTATCCTGCAGCTCCCATCACAAGAGAAAGGGTGACTTTTCCTCC
TGGAACAAGTTGTTGCGAACTTGTTGCTGTTGATGGTGAGACCACGTACCTATCTGACCAAGACATTGCAGCTGGTAGGATCCCGA
ACAATACTAGAACTCCATATGTCCCAGCAAAATCTAAAGCTTTGAAGAAAATCTCTGGGTCCAGCAAGGAGAGGACAACCGGAGGA
ACCAGTGTAAGAAGGTAAATAAAAGGCTTGTTCTGTCTGGTCTGGAGCTTCAATAAATCAGAGAAGAAGTCAGTGAGGCCTAAGAC
AAATCCTATGTAAGATGTTGCGATTGCAATAAGAGAGAATGCTTCTACAAAAGGACCAACGGTGACACTGGTTGATCTTAACTGTT
GCAGAGGATCGATCATCTTCTCAGCTGCCACACCAGTATCTGAAACGATCCAAGAATGACGGCATTCCAGACAAGAAACAGGCCAA
GAGGTATGGCTGTGCCAAGAACAATCGCCGTTCTTACTTTCGGCAAGTCACCTTCAAGATCTGTGCAGAGAACCGGCACCACATTC
TGGTAAACAAACGAGAGAGCAATAATGGGTATACTCATGGGAACGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 1034 | 6e-110 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 1006 | 1e-106 |
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 951 | 3e-100 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 941 | 4e-099 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 868 | 1e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX3 Elongation factor 1-beta 2 | 1011 | 1e-108 |
| Q84WM9 Elongation factor 1-beta 1 | 941 | 2e-100 |
| P29545 Elongation factor 1-beta | 822 | 1e-086 |
| P29546 Elongation factor 1-beta | 744 | 1e-077 |
| P93447 Elongation factor 1-delta | 705 | 4e-073 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 941 | 2e-099 |
| A9P7W8 Predicted protein | 835 | 5e-087 |
| B9GEM9 Predicted protein | 832 | 1e-086 |
| B3TLP3 Translation elongation factor EF-1 beta chain | 784 | 4e-081 |
| B6SIK8 Elongation factor 1-beta | 774 | 6e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 1012 | 8e-110 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 942 | 1e-101 |
| AT5G19500.1 tryptophan/tyrosine permease family protein | 697 | 3e-073 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 650 | 7e-068 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 650 | 7e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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