Information for unigene UN13768
| FASTA Sequence |
| Unigene ID: UN13768 | Length: 1365 |
SSR | | GGGTCCACTTCCTCTGATTCTCCAAACCTTCAAGCTTCTTCTCTCTCTCAAAGAATTCAATTATTTATTCTTTTTAATTAAAAATA
TATATTTTATATTTACTATTGTCAAAATCCATGCGATAGAATCTTTAGTCTATCTTCATCATCACTCATCATCATCTTTCTCTGTC
TATCGCTTCTTCCTCTCCAATGTCTAACTCCAAGGAAATCGGCACCGCGAGCCGCCGTATCTCCGTCGTCTCAAATCATCTCATCC
CCGTCGAACCGGTTCCAACTGGCGTTGACTCATTGGATCTCTCAACTGCTTCGTCGATGAATGACAAGTACCATAAGGTCCACGGT
GAAGTGCCGACTCACCAAGTCGTTTGGAGAAAAGCTGATCTCGTCGGTGACGACGGAGAAACAAAAGAGTTCGTTGACATTATATA
TGAGAAAGCCGTCGGGGAAGATATCGCGAAGATTACTATAAACCGGCCGGAGAGAAGAAACGCGTTCCGGCCTCAGACTGTGAAGG
AGCTTATGCGTGCGTTTAACGACGCTAGAGACGATAACTCTGTAGGTGTCATCATACTCACCGGCAAGGGAACGAAAGCGTTTTGC
AGTGGTGGTGATCAAGCGTTGAGGACATCAGATGGTTATGCTGATCCCAATGATGTTGGTCGACTTAATGTCCTTGATCTCCAGGT
TCAAATCCGGAGACTGCCAAAACCAGTAATTGCAATGGTTGCTGGTTATGCTGTTGGAGGAGGACATATCTTGCACATGGTCTGCG
ATCTAACCATTGCAGCCGACAATGCTATTTTTGGTCAGACGGGTCCTAAGGTTGGAAGTTTTGATGCTGGTTATGGAAGTTCAATC
ATGTCTCGTCTGGTTGGTCCTAAAAAGGCACGAGAAATGTGGTTCATGACGAGATTCTACACAGCTTCGGAAGCAGATAAAATGGG
ACTCATCAATGCAGTTGTACCGCTAGAGGATTTGGAGAAAGAAACTGTGAAATGGTGCAGAGAAATCTTAAGGAACAGCCCTACTG
CAATCCGTGTGCTTAAGGCAGCACTCAATGCGGTCGATGATGGTCATGCTGGACTTCAGGAGCTAGGAGGTAATGCGACCCTCTTA
TTCTATGGAACCGAAGAAGGTATAGAAGGAAGAACGGCTTATATGCAACGCCGCCCACCAGACTTCTCTAAGTTTTCCCGTCGACC
TTGAACTCACTATTAAGCTAAGTTCAGGTGTTTTCCATACAAATATTTGTCCTCATTTCAGTCAAATCCCTTTGTTTTGTTTGCCA
ATTTAATTCCAGACTTCAACTATGATAAACGATGAAGAATAATAATAATAATCCATCAAAACTTCATTTGAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176255 naphthoate synthase [Arabidopsis thaliana] | 1532 | 9e-168 |
| XP_002886610 hypothetical protein ARALYDRAFT_475277 [Arabidopsis lyrata subsp. lyrata] | 1529 | 2e-167 |
| BAC42141 putative enoyl-CoA hydratase/isomerase [Arabidopsis thaliana] | 1523 | 1e-166 |
| XP_002525362 Naphthoate synthase, putative [Ricinus communis] | 1378 | 6e-150 |
| XP_002300108 predicted protein [Populus trichocarpa] | 1369 | 7e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9CLV5 Naphthoate synthase | 950 | 1e-101 |
| P44960 Naphthoate synthase | 948 | 2e-101 |
| P0ABU1 Naphthoate synthase | 938 | 3e-100 |
| P0ABU0 Naphthoate synthase | 938 | 3e-100 |
| P23966 Naphthoate synthase | 881 | 1e-093 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3LF97 At1g60550 | 1532 | 6e-168 |
| Q8GYN9 Putative enoyl-CoA hydratase/isomerase | 1523 | 7e-167 |
| B9SH93 Naphthoate synthase, putative | 1378 | 4e-150 |
| B9GJU3 Predicted protein | 1369 | 5e-149 |
| A5B5A4 Putative uncharacterized protein | 1339 | 1e-145 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G60550.1 ECHID (ENOYL-COA HYDRATASE/ISOMERASE D); catalytic/ naphthoate synthase | 1538 | 7e-171 |
| AT4G16210.1 ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A); catalytic | 279 | 6e-025 |
| AT4G16800.1 enoyl-CoA hydratase, putative | 233 | 1e-019 |
| AT4G29010.1 AIM1 (ABNORMAL INFLORESCENCE MERISTEM); enoyl-CoA hydratase | 196 | 3e-015 |
| AT3G06860.1 MFP2 (MULTIFUNCTIONAL PROTEIN 2); 3-hydroxyacyl-CoA dehydrogenase/ enoyl-CoA hydratase | 167 | 6e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
can't close file: No space left on device at /var/www/cgi-bin/radish/EST/search.cgi line 576.
For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
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