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Information for unigene UN13784
| FASTA Sequence |
| Unigene ID: UN13784 | Length: 2231 |
| SNP | GGAACTCATAAGCCTTCTCTCCTCTCTCCTAAAAGACCAAACAAAACCACTGTTCTGATCTCGGATCTTTCCGTAATCTAGGGTTT
CAGATCTTACTTCAAACCATGAATCAGGAGAAGCTAGGGTTTTTCAGTGTCTCGTTTCTTCTGATCTTGAGTCTAGCCCTCGGTAG
ATTCGTCGTGGAGAAGAACAACCTCAAAGTCACGTCGCCAGATTCGATCAAGGGTATCTACGAATGTGCCATCGGGAACTTCGGAG
TTCCTCAGTACGGCGGCACACTGGTGGGAACCGTCGTGTATCCCAAATCGAATCAGAAGGCTTGTAAAAGCTTCAGCGATTTCGAC
ATATCCTTCAAGTCGAAGGCTGGTCGCTTACCCACTTTTGTTCTCATCGATCGTGGAGACTGTTTCTTCACTTTGAAAGCATGGAT
AGCTCAACAAGCTGGAGCAGCAGCGATTCTTGTAGCCGACAACAAAGCCGAGCCATTGATTACAATGGACACACCTGAAGAAGACA
AATCCGATGCAGATTATCTCCAAAACATCACCATTCCATCTGCTCTCATCACCAAGTCCTTGGGAGACAGTTTAAAGTCTGCTCTC
TCCGGTGGCGACATGGTGAACATGAAGCTGGACTGGACCGAGTCTGTTCCGCACCCTGATGAGCGTGTGGAATACGAGCTCTGGAC
TAACAGCAACGACCAGTGTGGGAAGAAGTGTGACACTCAGATCGAGTTTCTCAAGAACTTCAAAGGAGCTGCTCAGATTCTTGAGA
AAGGAGGGCATACTCAGTTCACTCCGCACTACATCACCTGGTACTGCCCCGAGGCTTTTACGCTGAGTAAGCAGTGCAAGTCTCAG
TGTATCAACCATGGAAGGTACTGTGCGCCTGATCCTGAGCAGGATTTTACTAAAGGGTATGATGGGAAGGATGTTGTGGTTCAGAA
TCTGCGCCAGGCTTGTGTTTATAGAGTGTTGAATGAGGCTGGCAAGCCTTGGGTTTGGTGGGACTATGTGACTGACTTCGCCATCA
GGTGTCCGATGAAGGATAATAAGTACACTAAGGAGTGTGCAGACGAGATTATCAAGTCCCTTGACATTGATCTCAAGAAGGTGGAC
AAGTGTATCGGAGACCCTAACGCAGATGTGGAGAACCCTATTCTTAAAGCAGAGCAGGAGTCCCAGGTTGGCAAAGGTTCCCGTGG
AGACGTGACTATACTCCCAACTCTTGTAGTGAACAACAGACAATACAGAGGTAAACTGGAGAAAGGGGCAGTGCTGAAAGCTATGT
GTTCAGGTTTTCAAGAGTCAACAGAACCAGCTATATGTCTAACTGAAGATTTAAATACTAATGAATGTTTGGAAAACAATGGTGGG
TGCTGGCAAGACAGAGCTTCCAACTTAACTGCATGCCGGGATACATATAGGGGAAGATTGTGTGAGTGCCCTACTGTTCAAGGTAT
TAAATTTGCTGGTGACGGTTACACTCACTGCAGAGCCTCTGGAGCTTTGCATTGTGGTATCAACAATGGAGGATGCTGGAGAGAAA
CCCGAGGCAGCTACACTTACTCTGCTTGCGTAGATGATCATTCAAATGGTTGCAAATGCCCACTTGGGTTCAAGGGCGATGGAGTA
AAGAGCTGTGAAGATGTGGACGAGTGCAAAGAAAAAAAGGTTTGCCAGTGCGCAGACTGTAAATGTAAAAACACATGGGGAAGTTA
TGAATGCAGCTGCAAGAATGGTTTGCTCTACATGCGTGAACACGACACGTGTATAGGTTCAAACAAAGTTGGAACTACAAAGCTCA
GCTGGAGCTTTTTGTGGTTTCTTATAATCGGAGTGGGTGTTGCAGGTCTTGCTGGATATGCCGTCTACAAATACAGGATCAGGACT
TACATGGATGCGGAGATAAGAGGCATCATGGCGCAGTACATGCCATTGGAGAGCCAACCTACCCCAAGTGGTCCTCATATGGATAT
ATGAGTGAAGTTGTCAACACAAACCAAGTGTCTCTCTTTCCACGGGAAGCTTCTTCTGTGTTTCTTCCATGTAAATGAATCTAATA
GACTTGAGAGAAGCCACACAAAAAATAATAATTTAAGTGTACTCAGCGCTTTTTGTAAGGGATGTGGATTTGAAGATGGAATCACT
CTTTTGTCTGCAATTACTCTTGCAATGTAAAATAAAGACTTTAATGGATGAATAAATAAGTAGGAGAGTTTGCATCTATAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876170 hypothetical protein ARALYDRAFT_906663 [Arabidopsis lyrata subsp. lyrata] | 3197 | 0.0 |
| NP_190853 vacuolar-sorting receptor 1 [Arabidopsis thaliana] | 3188 | 0.0 |
| AAB72111 vacuolar sorting receptor homolog [Arabidopsis thaliana] | 3183 | 0.0 |
| AAK82551 AT3g52850/F8J2_20 [Arabidopsis thaliana] | 3181 | 0.0 |
| XP_002528694 Vacuolar sorting receptor 1 precursor, putative [Ricinus communis] | 2737 | 3e-307 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93026 Vacuolar-sorting receptor 1 | 3188 | 0.0 |
| O22925 Vacuolar-sorting receptor 2 | 2547 | 1e-286 |
| O80977 Vacuolar-sorting receptor 3 | 2508 | 5e-282 |
| Q56ZQ3 Vacuolar-sorting receptor 4 | 2504 | 1e-281 |
| P93484 Vacuolar-sorting receptor 1 | 2406 | 3e-270 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SRT1 Vacuolar sorting receptor 1, putative | 2737 | 2e-307 |
| B9HDJ2 Predicted protein | 2735 | 4e-307 |
| Q2PYW3 Vacuolar sorting receptor protein PV72-like protein | 2634 | 2e-295 |
| O48662 PV72 | 2628 | 9e-295 |
| P93027 Vacuolar sorting receptor homolog | 2490 | 9e-279 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G52850.1 VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1); amino-terminal vacuolar sorting propeptide binding | 3189 | 0.0 |
| AT2G30290.1 vacuolar sorting receptor, putative | 2547 | 1e-287 |
| AT2G14740.1 ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3); calcium ion binding | 2508 | 4e-283 |
| AT2G14740.2 ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3); calcium ion binding | 2508 | 4e-283 |
| AT2G14720.1 VSR-2; calcium ion binding | 2504 | 1e-282 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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