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Information for unigene UN13788

FASTA Sequence
Unigene ID: UN13788Length: 1137  SNP
GAGTTAAGATTCGCTTGATTCAGTTTAGTTTTATTGGGTTTGAATATTTGCCTAACTCTGTAAAAACTGAGGGATGCCAAGTTGAT
AATAAAGTCTAACATAATCTGTAAGTTTAACATAGAGGAGATTTTGAGTTTTCTTAATTTTGATGAGCACCACAAACGAAAAACCA
CAAAACTTGATGAATCGTTGAACTAGAGAGCGATGTTGAATCCCGGATGAACTAGGGCTTGTACGAAAGCTTCCATACCTCTCTGA
CATTTGAGGAGCCATCTGTGACTTCAGACACCAAGGTTGAAGCAAGAACGCCGTCTTTCTCAATCATAGACAGGAACTGCCTCGTC
CCTCCACCAACCCCGAAATAGTACTTCTTTGCAGCCATGTACACTGCTCCATCAGGATAGGCCAAGCACCTTTTGATCAGTTCATA
GAGACTTTTCTGAGCAGAGATGGAATAAATAGTCTCAGCCATTAGAATGATGTCATAACCACCCTTCTTCTCAGTCTCACCATCAT
TAACTAGTGGAAGAAGCTGATGAACTTCACTCCACTCACCAGCAAAGAAGCGTACTTCTCTATCACTATCTGAATCAGACGGAGAC
TTCTGGGAGAGATTAGCATTCAGATTGGGAATGGTGAGACATCGAAGGACCTCAGCATTAAAGTCCTGGAAATGAACTGCATCCGC
ACCCTTGAGACGCGCATAGATTCCTGGAAGTGCATGACCACATCCAAGCTCGAGGACCCGTTTTCCAGGGAATGATATGTTCCCAG
TTTGTGACTCCTTTTCAAGAGCTTTGACAAGATCTATAGATCCTTCCCAAAGCTTAAGCCCACCTTCATATACTCCAGGAACCAAA
TCCGAATTAGGCAATCCAAAGACCTCTTTAGTGTTCACACGACCCTTCAAAAGAGTGACTTCGCCGATATTCAATTTATCTACTGT
GAAAGCAACGGAGGAAGACACCTCGGAGGAGAATACTTCAACAGGAGGAGGCGGTGGAGGACGAGGTGGTTCTGGTGAATCGAAGA
ACCCTAAACCTTGGGATGATGACTTATCGTTCGAAGAAGAGAAAAGCTGAAACGTCGCCATCGATGAAAGCTTCGGCAGCAGCTCT
TCAACACGGAAGAGCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM63649 unknown [Arabidopsis thaliana]12853e-139
XP_002870342 hypothetical protein ARALYDRAFT_493511 [Arabidopsis lyrata subsp. lyrata]12782e-138
NP_567417 Putative methyltransferase family protein [Arabidopsis thaliana]12711e-137
XP_002300145 predicted protein [Populus trichocarpa]10183e-108
XP_002269192 PREDICTED: hypothetical protein [Vitis vinifera]9753e-103

Swiss-Prot top hits (Blast detail)Scoree value
Q9CZ09 UPF0558 protein C1orf156 homolog3396e-031
Q4KM84 UPF0558 protein C1orf156 homolog3361e-030
O95568 UPF0558 protein C1orf1563342e-030
Q55DL2 UPF0558 protein2285e-018
Q2KIJ2 UPF0558 protein C1orf156 homolog2204e-017

TrEMBL top hits (Blast detail)Scoree value
Q8LCI2 Putative uncharacterized protein12852e-139
Q8VY62 Putative uncharacterized protein At4g1400012719e-138
B9GFI8 Predicted protein10182e-108
B9T2Q0 Putative uncharacterized protein9715e-103
A9SSP1 Predicted protein (Fragment)6463e-065

Arabidopsis top hits (Blast detail)Scoree value
AT4G14000.1 unknown protein12733e-140
AT2G43320.1 unknown protein3111e-028
AT2G43320.2 unknown protein3111e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  25%
 
112  17%
 
82  17%
 
104  33%
 
91  8%

Unigene MembersMember information