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Information for unigene UN13793
| FASTA Sequence |
| Unigene ID: UN13793 | Length: 1136 |
| SNP | AATAAACTCTATTAAAATATCATTTTAACTCATGAAAATGAACTTTTGTCTGTTTCTAAATTGCAATTTCGGAAAACTACAACAAG
AGTCAAAATCTTATACAAACTTTGTAAAAAAAAAATTGAAACCAAAAGTAACATTCCACATTTTTCAGTAAAACCATTAGGAATCA
AAAGCTGATTACAGCATCTGAGCAGCTGTGTTGAGCTTCTCCGCTAGACTCAACTGTGTCCTTATTATGCTTGATAAGTACAACAG
AAGCAATTGATCCTGGAGACTATCATTCACGACATTATCGAAGACTTGTGGGGGTAACTTGGGAAGGGATGCTACTGCCTCTGCAA
TAAACCGTCCTATGTTGTTGTCTGGAGATGTTTGACCTTCCACGACACTGTCAACATATTTGTAGACATCGTTGATTAGAGTCAAC
AGCCTCTCCATTGTCAGCTCCATTCCTTCCATGTCATTTGGAAGTTTGTCAACAGCTGTTGCCTTGAGGACATCGTATCCGACTCT
CTCGGCATCAACCATACGGAGATCAACAGGAATCTCTTGAAACTGTGCAGCGAGTTGTCGGTCACCAAGTGAAAGGTTAGAAGAGA
CGTAAGCTTTTATGGTACCTTCACCGTTAGTGAATCCAGTGTCCACTGTAAGGTGAATAGGGTTGGTGACTTCCCTAGCAAAGAAG
TCATGAATCAGTGCACTACCGCCATTGACCCCAGCACCCGTAGAATACCAGCCAACAATTACTTCCTTTGGATTCACCTTAAGGTG
TGAAGCTAACATGTTGTGGTGGTAATCAATATCCACAGCAACCTGATCGGAGGATTCATTGTGAGGGACGGCGTAGGAGTTGCGGA
TATCGACGGTGCCGTCAGGTAGGATGGATCCGAGGAGAGTGCCGATGACTCGTTCGGCTGAGTCGGGACGTCTCACGAAGCAGTCG
CAGACGTTGAAGATGACGAGAGGGTGGATTCGCGCTGTGAGCACTGGGGTTGTGTTTGTGGAGGCCGTCGATGATGGAGTCACGAA
TTGCAAGACGGTGAGATCGTTTGTTGCCGCCATGGTTGAGATTTGTGAGGATCGACAACGGTGGAAGGCGCGAGTCTGGAGATTTT
AGGGTTTTCCGATGCCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002862370 26S proteasome regulatory subunit [Arabidopsis lyrata subsp. lyrata] | 1375 | 1e-149 |
| NP_181528 translation initiation factor eIF-3 subunit 5 [Arabidopsis thaliana] | 1359 | 8e-148 |
| AAL32634 26S proteasome regulatory subunit [Arabidopsis thaliana] | 1354 | 3e-147 |
| XP_002315172 predicted protein [Populus trichocarpa] | 1183 | 2e-127 |
| ACU19424 unknown [Glycine max] | 1183 | 2e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04202 Eukaryotic translation initiation factor 3 subunit F | 1359 | 3e-149 |
| O00303 Eukaryotic translation initiation factor 3 subunit F | 537 | 7e-054 |
| Q4R5B8 Eukaryotic translation initiation factor 3 subunit F | 537 | 7e-054 |
| A5A6I3 Eukaryotic translation initiation factor 3 subunit F | 537 | 7e-054 |
| Q9DCH4 Eukaryotic translation initiation factor 3 subunit F | 536 | 9e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W4H4 26S proteasome regulatory subunit | 1354 | 2e-147 |
| A9PCS2 Predicted protein | 1183 | 1e-127 |
| C6TC72 Putative uncharacterized protein | 1183 | 1e-127 |
| B9SLJ5 Eukaryotic translation initiation factor 3f, eif3f, putative | 1164 | 2e-125 |
| B7FK44 Putative uncharacterized protein | 1160 | 6e-125 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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