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Information for unigene UN13814
| FASTA Sequence |
| Unigene ID: UN13814 | Length: 1062 |
SSR | SNP | GGACAGTTTACTACACACACACTTCCCACCTTTATTTAAACAAGTCTCTCTCCTTCACTCGATCATCATCATCATCATAATCTCTT
TCTTCTTCAACGAGTTATAAGCAATGGCAAAGTCTCTAGCTGGATTGGCGCTTTTGGCCGCTCTTTTTGTGGCGGTTGATGGGTTT
AGGCCTTCTGGTTTAACCAATGGTCATGCCACATTCTATGGAGGGAGTGACGCTTCTGGAACAATGGGCGGAGCTTGTGGGTACGG
AGATCTCTACTCGGCGGGGTACGGGATAATGACGGCGGCGTTAAGCACGGCTCTGTTTAACAACGGAGCTTCTTGCGGCGAATGCT
ATAGGATAACGTGTGATTACGCGGCGGACTCACGGTGGTGCAGGAAAGGAGCTTCGGTGGTCATTACAGCAACCAACTTCTGCCCA
CCGAACTTCGCTCTTCCCAATAACGACGGTGGTTGGTGCAACCCGCCGCTCAAACATTTCGACATGGCACAACCCGCTTGGGAAAA
GATCGGAATCTACAGAGGAGGAATCGTCCCCGTCGTGTTCCAAAGAGTAAGCTGTTACAAGAGAGGAGGAGTGAGATTCAGAATCA
ACGGAAGAGATTACTTCGAGCTAGTGAACATATCGAACGTAGGAGGAGCTGGTTCGATTCAATCTGTATCCATTAAAGGATCAAAG
ACTGGCTGGTTAGCTATGTCTCGCAATTGGGGAGCTAATTGGCAATCAAACGCTTATCTCGATGGTCAATCTCTTTCTTTCTCCAT
TACTACTACTGATGGTGCTACAAGAGTCTTCCTCAATGTTGTTCCTTCTTCTTGGTCTTTCGGACAGACTTATTCTTCAAGAGTTC
AGTTTTAAGATTGTTTTGTTTGTCTGTCTGTCTGAAGAGTTATTGGCTGTGGTCGCGCTCTGTGTCTCTGTTTCTTCTCTTCTGGA
GCGACCCGCCCGCCCGCTTTTTTTTTTCTTCTTTGTGGTTTTATGGGTCTGTAACGTCTGTTAATGGAGAAGATCCGATTCTATTT
GAGGAAATGATTACATATAATTTTTGTGTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173446 expansin-A11 [Arabidopsis thaliana] | 1293 | 3e-140 |
| AAM61082 Alpha-expansin 11 precursor (At-EXP11) (AtEx11) (Ath-ExpAlpha-1.14) [Arabidopsis thaliana] | 1290 | 7e-140 |
| XP_002893092 Alpha-expansin 11 precursor [Arabidopsis lyrata subsp. lyrata] | 1288 | 1e-139 |
| XP_002510588 Alpha-expansin 11 precursor, putative [Ricinus communis] | 1096 | 2e-117 |
| ACU18436 unknown [Glycine max] | 1091 | 8e-117 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LG16 Alpha-expansin 11 (At-EXP11) (AtEx11) (Ath-ExpAlpha-1.14) | 1290 | 5e-140 |
| B9R8E5 Alpha-expansin 11, putative | 1096 | 2e-117 |
| C6T9D4 Putative uncharacterized protein | 1091 | 6e-117 |
| Q8GZD3 Expansin | 1087 | 2e-116 |
| B9GQ86 Putative uncharacterized protein PtrEXPA17 | 1076 | 3e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G20190.1 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) | 1294 | 9e-143 |
| AT1G69530.4 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 863 | 9e-093 |
| AT1G69530.1 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 859 | 3e-092 |
| AT1G69530.3 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 859 | 3e-092 |
| AT1G69530.2 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 859 | 3e-092 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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