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Information for unigene UN13824
| FASTA Sequence |
| Unigene ID: UN13824 | Length: 735 |
| SNP | GGAAGTCCTAACCGCTTCTTGAATTTCTTCACATTATATAAGATGTAATGTGACATAACATAATGTAATGAGTACAGAGATTTCAT
GTGAAGAGAGATATATATCATATACAACACAAATACAATTAAGCAAGAAGCTCCACCACGTCGTCTATCGATTTCAATGTCTTCTC
GTAGTAGAGATACGACTCGTAAACCTTTGGCGTCCGTACGTAAAAGTCCAACTCACTCATGTTTTCCACTAGTTGGTTTGCGGCTA
GAACGTAATCATTCCGGCGACTCTCCGGCAAGATGTTCATGGCGTTGGTCAGATCCTGAGACAGATAAGCCTGTTTTAATCGTAAG
TAAAAGATGACGTACCTCCACGACATATGGTCCAACATCTCCCTCATGTCTTTTAATCCTTCAGCCGTCTGTTTTATACGAGCCGC
AGCGTCCTCCGGCGATAACCCTGGCTGAAAGTATTTCTCCTTTATGAATGACCTCGTCCCCCATTTCTCCTGTGCTAATGCTGATG
ACGTGGGGACGATGGCCGTGAGTGTTATAAGCGTTGACAGGGTTCTCCGGCGAGTAAAGCTGTCTTGTTGGGATTCTCTGACGCAG
CAAATGACAGGGTATAGTGGGTTTACGCGGCGATGGTGATTTGGCCGGCGTAGATAAGGTGGTGGAGTTTTGGTGGTGAAGGAGCT
CATTTGTTTTTGTTTTTGTTTTTTTTTCTCTTCCTTTTTTTAATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890040 hypothetical protein ARALYDRAFT_471574 [Arabidopsis lyrata subsp. lyrata] | 839 | 7e-088 |
| NP_563937 photosystem II oxygen-evolving enhancer protein [Arabidopsis thaliana] | 806 | 5e-084 |
| BAF01486 hypothetical protein [Arabidopsis thaliana] | 784 | 2e-081 |
| NP_973820 photosystem II oxygen-evolving enhancer protein [Arabidopsis thaliana] | 653 | 3e-066 |
| XP_002272064 PREDICTED: hypothetical protein [Vitis vinifera] | 541 | 3e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic | 158 | 3e-010 |
| Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic | 149 | 3e-009 |
| Q41048 Oxygen-evolving enhancer protein 3-1, chloroplastic | 147 | 6e-009 |
| P83646 Oxygen-evolving enhancer protein 3, chloroplastic | 138 | 7e-008 |
| Q0D5P8 Oxygen-evolving enhancer protein 3, chloroplastic | 138 | 7e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI73 F7A19.23 protein | 806 | 3e-084 |
| Q0WN14 Putative uncharacterized protein At1g14150 (Fragment) | 784 | 1e-081 |
| Q3EDD0 Uncharacterized protein At1g14150.2 | 653 | 2e-066 |
| B7FN42 Putative uncharacterized protein | 496 | 3e-048 |
| Q5NRN3 Putative oxygen evolving enhancer protein 3, identical | 475 | 8e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14150.1 oxygen evolving enhancer 3 (PsbQ) family protein | 807 | 2e-086 |
| AT1G14150.2 oxygen evolving enhancer 3 (PsbQ) family protein | 653 | 1e-068 |
| AT4G05180.1 PSBQ-2; calcium ion binding | 159 | 2e-011 |
| AT4G21280.1 oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | 150 | 2e-010 |
| AT4G21280.2 oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | 150 | 2e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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