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Information for unigene UN13826
| FASTA Sequence |
| Unigene ID: UN13826 | Length: 1157 |
SSR | | GGACTGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCCTCTTCCCAAATCCCAATAACAAAACTCTCCTCTCTCTCTCT
CTCTCTTCCAATCTTCTTCAGATTCGAAATGGCTGCAGCAATCGCTTCTCTCTCCTTTCCGGCGCTGGGCCAATCCGCAAAGATCT
CCAATTCAACCACGCCTTCTCTTCCTCTCGCCTCCGTCTCCGCCATCTCCAGGAGGATTTCTCGTCACTCTCTGACTTCTTCTAGA
GCATTCACTTCCTCTTCGAAATTAATTATCCACTGCATGTCTAGTGTTACCGATGTGCCACCTGTATCGGAGACAAGGTCAAACTT
CCTAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTTCTGCAGGAGCTCATCGTACAGCAGCATTTGATGAGGTATA
AAAAGACTTACCGTTACGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGGATGGTTACCCCAGCGATCAG
GATCGTGATTCCATTTTTCAAGCCTACGTTCAAGCTTTGAATGAGGATCCTAACCAATACCGAATTGATGCGCAGAAGATGGAGGA
ATGGGCCCGAAGTCAGACTTCTGCTTCACTAGTTGGCTTCTCGTCTAAGGAGGGAGAAGTTGAAGCGATTCTTAAGGACATTTCAG
AAAGAGCTGGCAGTAAGGAAGGTTTCAGTTACAGCAGGTTTTTCGCTGTTGGCTTGTTTCGCTTGCTTGAGCTTGCAGGTGCTACT
GATCCCACCGTCCTTGACAAGCTTTGTGCATCCCTAAATATCAACAAGAAAAGCGTGGATCGGGACCTCGATGTGTATCGCAACCT
GCTTTCAAAGCTTGTCCAAGCCAAGGAACTACTCAAGGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGCAGCCGAAT
CCCAGAAAGCCAACGAATCAGTCTCCAAGTCTTTGGGGGATAATAGCTTATCTTTCTTGGTTTAATGGAAATCATAAACAATCAAT
TTGTGAATTTTTTTTTTGTTTTTGTTTATTGTTCTTAGTAACAACTGCAACTACTTGACCCTAAGACATACGTGTGCTCATTCCTA
AGAACAAATATCTCTTTCGATTTTGTGAGTTTTTTACAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89647 chloroplast light-regulated protein [Brassica rapa] | 1263 | 1e-136 |
| XP_002884230 hypothetical protein ARALYDRAFT_900469 [Arabidopsis lyrata subsp. lyrata] | 1202 | 1e-129 |
| NP_565491 protein THYLAKOID FORMATION 1 [Arabidopsis thaliana] | 1182 | 3e-127 |
| AAM64943 unknown [Arabidopsis thaliana] | 1169 | 9e-126 |
| XP_002275686 PREDICTED: hypothetical protein [Vitis vinifera] | 1027 | 3e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SKT0 Protein THYLAKOID FORMATION 1, chloroplastic | 1186 | 4e-129 |
| Q7XAB8 Protein THYLAKOID FORMATION1, chloroplastic | 980 | 3e-105 |
| Q84PB7 Protein THYLAKOID FORMATION1, chloroplastic | 926 | 6e-099 |
| B8HQ62 Protein thf1 | 337 | 1e-030 |
| Q31MY4 Protein thf1 | 335 | 2e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXS3 Chloroplast light-regulated protein | 1263 | 7e-137 |
| A7XZB8 Chloroplast-localized protein | 1018 | 2e-108 |
| B9I6H1 Predicted protein | 996 | 7e-106 |
| C6T9W9 Putative uncharacterized protein | 996 | 7e-106 |
| B9RW80 Protein THYLAKOID FORMATION1, chloroplast, putative | 986 | 1e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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