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Information for unigene UN13831
| FASTA Sequence |
| Unigene ID: UN13831 | Length: 1112 |
| SNP | CGAATCATTTCTACCTCTTAAAACGCAAAAGCAACTGAACTTAAAGAGCATTCAAATCAGCAAAATTACCCGTTTTAGATCAAAAT
TCAAACAAGACTCAAAAGGTGCAACAATTCTTACACAATTGAAATAATATTTCTCTAAGATAAAGCATAAACCAGCAAAATTAACC
GTTTTAGCTCTTAAAAAAAGAGCAGAACTTTAGAACATTTAAAAGGTAAAGAAACTCAAAACAACTCTTGACATTTACCATAATCA
GGCCTCATCAGCGGGTTTCTTATCCTCTGAAGCTCCATTAGTTTCTGCTCCTGCTTCAGTGCTCTCTTCAGGTGGCTGAACCTGCT
CATCCTCAGGTAGAGGCTCTTCCACATAATCATTCTCAAAAGCATCAGCCGGAACCTCGTAAATCCTAACTTGCGGCTTCGACGGA
TCCTTAACAAGAACATACTTCCCTTCACTCAGCTTCATACACAGATCAACAATCGACTTCACAATCCCCCACATGTTCAAAGTGTT
CAGATTAATCTGCCCAGCGAAATCCTTCGGCTTATACCCCAACACCGACAGTATCACATGGTTAAAATGGTCACGAGGATGAACCC
TAGACACAAAACCAATCTTCATCATATCCGCGTTAGCCAAAAGCGCCTGCGCGGTCCACCTAGCCAACTTATTACCGTTGTTCTTC
AGCTCATTAGCCAAAACCGCACCTCTCTGAGTCTCGAGCTTCTGCCTCCAGTCAACACCCGAGTATTTCGGATCAAACTCGTTGAG
AGCGTTCAAAGTGGGGAAAGACTTCTGGTTGTTGAGATCAACAGTGCTCTGCAACTCACACCTAGCAACCAGATACATGCTATCAT
CCAGTTTCCATCTCCTATACCTATAAGCAACAGAAGCATTCTCCTCACCTTCACTCACATTAGGTATCGGCTCATCGAAAGCTTCC
CTCTTCCCGTTCTTAACCAAAATCTGCTGAGCGAAGTTCTGATTAATGAAAGCCGCCTCAAGGCCAAGAGAATGAGCAGAGTTGAT
ATCCCCCTTCCCCTCAGGTAAAGGCTCCTGAGAAGTCTCGTGAACCGACAACAGATCGAGAGGAGAACCTCCCTCTTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199245 translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] | 1373 | 2e-149 |
| XP_002863589 hypothetical protein ARALYDRAFT_917176 [Arabidopsis lyrata subsp. lyrata] | 1336 | 3e-145 |
| NP_193830 translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] | 1243 | 2e-134 |
| AAG53638 initiation factor 3d [Arabidopsis thaliana] | 1243 | 2e-134 |
| AAL38704 putative translation initiation factor eIF3 [Arabidopsis thaliana] | 1243 | 2e-134 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P56820 Eukaryotic translation initiation factor 3 subunit D | 1243 | 9e-136 |
| B4HHG8 Eukaryotic translation initiation factor 3 subunit D-2 | 660 | 4e-068 |
| Q16UF8 Eukaryotic translation initiation factor 3 subunit D | 660 | 4e-068 |
| B4QT07 Eukaryotic translation initiation factor 3 subunit D-2 | 659 | 5e-068 |
| Q0ZB77 Eukaryotic translation initiation factor 3 subunit D | 653 | 2e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FKV6 Eukaryotic translation initiation factor 3 subunit 7 | 1373 | 1e-149 |
| Q8VZ60 Putative translation initiation factor eIF3 | 1243 | 1e-134 |
| Q9C5Y8 Initiation factor 3d (Fragment) | 1243 | 1e-134 |
| B9N3G6 Predicted protein | 1176 | 9e-127 |
| B9RBD0 Eukaryotic translation initiation factor 3 subunit, putative | 1175 | 1e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G44320.1 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1374 | 5e-152 |
| AT4G20980.1 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1243 | 8e-137 |
| AT4G20980.2 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1243 | 8e-137 |
| AT4G20980.3 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1243 | 8e-137 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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