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Information for unigene UN13835
| FASTA Sequence |
| Unigene ID: UN13835 | Length: 1244 |
SSR | | GGAATCTCTTCGAACGGTTCTTAATTTTCTCGACGAGATCTCTCTCTCTCTCTCTCCACCTTCCACCACCGTGCGGAGAGGGATGT
CGAAAGCTCGTGTTTACACCGACGTCAACGTGATCCGACCCAAGGAGTATTGGGATTACGAGTCTCTCAACGTTCAGTGGGGGGAG
CAAGATGATTACGAGGTTGTCAGGAAGGTGGGGAGAGGCAAATACAGTGAGGTGTTTGAGGGGATTAACGTGAACAACAACGAGAA
GTGCGTTATCAAGATTCTCAAGCCTGTCAAGAAGAAGAAGATTAGAAGAGAGATTAAGATACTTCAGAATCTCTGTGGAGGGCCAA
ATATTGTCAAGCTGTTTGATGTTGTGAGAGACCAACACTCAAAAACACCAAGCTTGATATTTGAGTATGTTAACAGCACTGACTTC
AAGGTTCTGTATCCGACTTTGACTGATTATGACATCCGTTACTACATCTATGAGCTGTTGAAGGCGTTGGACTACTGCCACTCGCA
AGGTATAATGCACAGAGATGTCAAGCCACACAATGTCATGATTGACCATGAGCTCCGCAAACTTCGCTTAATTGATTGGGGTCTCG
CTGAGTTTTATCATCCTGGAAAAGAGTATAACGTCCGTGTGGCCTCAAGGTACTTCAAGGGACCGGAACTTCCAGTGGATTTACAG
GACTATGACTATTCCTTGGACATGTGGAGCCTCGGTTGCATGTTTGCTGGGATGATATTCCGCAAGGAACCTTTCTTTTATGGCCA
TGATAACCGATGAACTGAATGCATATCTGAATAAGTATCAGTTAGAACTTGATGCCCAACTAGAGGCACTTGTTGGGAGACATAGC
AGGAAGCCTTGGTCCAAGTTCATCAATGCTGACAATCGCCATTTGGTCTCACCTGAGGCGATTGATTACCTCGACAAGCTACTGCG
GTATGATCATCAAGACAGGTTAACTGCAAAAGAAGCAATGGCTCACCCTTATTTCGCGCAAGTCAGGGCAGCAGAAAGCAGCAGAA
CGAGAACTCAGTAGAGATGTTTTCTGAGTATGTCAAAGTGACGTGATGTTATGGTTATTGTTTTCTTTAAAGAAGTGATGTCACTG
CCTAATCCTAAAAGTTTATCAGATATTCTTGAGACTGCTTTCATGTATTTTCAAACTTGTAGAACTATATTGGGTTTAAAACCTCT
ATCAAGTCGAATTTAAAAACATAACAAGTCGATATTTTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876010 hypothetical protein ARALYDRAFT_485358 [Arabidopsis lyrata subsp. lyrata] | 1242 | 3e-134 |
| NP_190569 casein kinase II, alpha chain 2 [Arabidopsis thaliana] | 1240 | 6e-134 |
| AAK44123 putative casein kinase II, alpha chain 2 CK II [Arabidopsis thaliana] | 1240 | 6e-134 |
| Q08466 RecName: Full=Casein kinase II subunit alpha-2; Short=CK II | 1239 | 7e-134 |
| EEC76225 hypothetical protein OsI_13634 [Oryza sativa Indica Group] | 1236 | 2e-133 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q08466 Casein kinase II subunit alpha-2 | 1239 | 3e-135 |
| P28523 Casein kinase II subunit alpha | 1225 | 1e-133 |
| Q08467 Casein kinase II subunit alpha-1 | 1218 | 8e-133 |
| O64817 Probable casein kinase II subunit alpha | 1197 | 2e-130 |
| Q02720 Casein kinase II subunit alpha | 1039 | 5e-112 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8H120 Casein kinase II, alpha chain 2 (CK II) | 1240 | 4e-134 |
| Q8H765 Putative casein kinase II, alpha chain 2 CK II (Fragment) | 1240 | 4e-134 |
| B8AK92 Putative uncharacterized protein | 1236 | 1e-133 |
| Q4W6C2 Casein protein kinase 2 alpha subunit | 1232 | 3e-133 |
| Q8H386 Casein kinase II alpha subunit | 1230 | 6e-133 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G50000.1 CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase | 1240 | 2e-136 |
| AT5G67380.1 CKA1 (CASEIN KINASE ALPHA 1); kinase | 1225 | 1e-134 |
| AT2G23080.2 casein kinase II alpha chain, putative | 1197 | 2e-131 |
| AT2G23080.1 casein kinase II alpha chain, putative | 1197 | 2e-131 |
| AT2G23070.1 casein kinase II alpha chain, putative | 1148 | 1e-125 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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