 |
Information for unigene UN13839
| FASTA Sequence |
| Unigene ID: UN13839 | Length: 1015 |
SSR | | GGGTGAAAGAGAGAGAGAGAGAGGGGGGAAGAGAATCAATCAGTGATGGGAGATGTCAAAGTAGACGATGATGCGATTCTAAAATC
CTTCCTTGCGGAGGTCGGGGAGGTTGAGAGGGACAACGAAGTCGTCAGGATTCTCTCATGCTTCAAGCTGAACCCGTTTGAGCATC
TTAACTTATCTTTCGATTCTTCCACGGATGACGTTAAAAGACAGTACAGAAAGATATCTTTGATGGTTCACCCTGACAAATGCAAG
CATCCTCAAGCACAGGAGGCTTTTGGAGCATTGGCAAAGGCGCAACAGCTGCTGCTGAACGACCAAGAAAGAGATTATATTCTCAC
TCAAGTCCAAGCTGCCAAACAAGAGCTTAAGATGAAGAGAAAGAAACAGTTGAAGAAAGATACCGCCTCCAAAATAAAGTCCTTGG
TTGATGAGGGAAAGCATGAGCAACTATATGAACAATCTGAAGAGTTTCAGAAGGAGCTTAAGTTAAAGGTCCGAGAGATATTAACA
GACCAAGAGTGGCGTAGGCGAAAAATGGCTATGAGGATATCAGAAGAAGAGGGGAGACTGAAGAAGGATGAAGAAGAACAAAAAGA
GATACGGAAGAAAAAGCGTGAGCATGAAGAACAGTGGGAATGAACGAGAGAAAACAGGGTGTCAAGCTGGAGAGACTTCATGAAAG
CAGGAAAGAAGGCCAAAAAGGGAGAGACACGTCCTCCAAAACTGAAGACTGAGGACCCAAACAAATCATTCGTTCAAAGGCCGGTC
AAGAAAGGCTGATCCCTGTCTCCGTTTGCTGTTGTTGCCATTGATAGATTGGTCTTCTCGAGTCTGTGTTTCTGCTCGTGTCTGTG
TTTCTCTTTGTACATCACCAACTTCTTGGTCTTTCCAAACACATCAGAAACATGGAAGAGATATATAAATTTATCTCCACTTCTTA
AACGCTTATGACCTTTTAACCTTATGTATTGTGTTAAACATTATATAATACACTTCGTCTTTTTTTTAT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874045 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1199 | 2e-129 |
| NP_680194 DnaJ homolog subfamily C member 8 [Arabidopsis thaliana] | 1198 | 3e-129 |
| XP_002299768 predicted protein [Populus trichocarpa] | 1060 | 3e-113 |
| XP_002513734 J domain-containing protein spf31, putative [Ricinus communis] | 1053 | 2e-112 |
| XP_002314254 predicted protein [Populus trichocarpa] | 1046 | 1e-111 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O74746 J domain-containing protein spf31 | 185 | 4e-013 |
| Q95J56 DnaJ homolog subfamily C member 14 | 140 | 6e-008 |
| Q921R4 DnaJ homolog subfamily C member 14 | 139 | 8e-008 |
| Q6Y2X3 DnaJ homolog subfamily C member 14 | 138 | 1e-007 |
| Q5XIX0 DnaJ homolog subfamily C member 14 | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C580 Putative uncharacterized protein At5g22080 | 1198 | 2e-129 |
| B9GHL8 Predicted protein | 1060 | 2e-113 |
| B9RJ15 J domain-containing protein spf31, putative | 1053 | 1e-112 |
| B9HQ72 Predicted protein | 1046 | 9e-112 |
| B9DHQ5 AT5G22080 protein (Fragment) | 1041 | 3e-111 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G22080.1 DNAJ heat shock N-terminal domain-containing protein | 1199 | 9e-132 |
| AT1G65280.1 heat shock protein binding | 183 | 6e-014 |
| AT3G57340.1 DNAJ heat shock N-terminal domain-containing protein | 141 | 4e-009 |
| AT3G57340.2 DNAJ heat shock N-terminal domain-containing protein | 141 | 4e-009 |
| AT5G05750.1 DNAJ heat shock N-terminal domain-containing protein | 135 | 2e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
