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Information for unigene UN13847
| FASTA Sequence |
| Unigene ID: UN13847 | Length: 863 |
| SNP | GGATATGAGGGTATCATAGGACACAGACAGAACTCTGCGGTTTCTCTCTTTACACCAGCCACCAGAGTACAAGGGGGGCGCCAAAG
AGGCGACGTCTTAGCTTCTTGCTTGTGAATGATGACAATGCAGACAATCATCCACAAGCTCTCGTTCTGTAGCTTCAACTCTGTCA
TAATAGAACGGAAACCAACAAGACTTCATCTTTCTTCTTTTGTAACTCTTCCTCCAACTTTCTCAATTCAACCGAGATTCTGCACA
AGAGCAACGAATAAACAGTTCGTCGCAGCTTGTGCAGCACCATCAGATGTTGAGACTTCTTCTAAGGATGAATCAGTTTCGATTAC
GACAGTGGAGACCGCAAACAGCAACGAAGTCAAGGTGCATGTTGAAGTCTCAGGAGAGAAGACTCAAACAGTATTCAACACTGTCT
TTGATAAAATGGTTGCTGCAGCTCAGCCAATCCCGGGCTTCCGAAGAGTTAAAGGAGGGAAGACCCCAGATATACCCAGAGAAATT
TTGTTAGAGATCCTTGGATATTCTAAAGTCTATAGACAGGTGATAAAGAAGCTAATCAACTCTGCTATCGATGACTATGTTAAACA
GGAAGACCTAAAGGTTGGCAAAGAGTTGTCTGTCGAGCAAAGCTATGAAGATCTTGAAGAAACATTTGAACCAGGCGAAAGTTTCA
GCTTTGATGCTACTATAAAGCTTCAAGAAGTGAGCTGAACGAATGTTGTTGAACCCTAGGTACTTATCCATGTGATTTATCATTCT
ACCTGGTGTGGTAAACAATTCTTGTTGAGTAGGAAAGGATAAATCTCAGTTGGATTGAGCTTTGTGGTATAATAAAGTTTGAAAAC
TTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565704 uncharacterized protein [Arabidopsis thaliana] | 841 | 6e-088 |
| XP_002881125 hypothetical protein ARALYDRAFT_902063 [Arabidopsis lyrata subsp. lyrata] | 809 | 3e-084 |
| CBI24665 unnamed protein product [Vitis vinifera] | 487 | 6e-047 |
| XP_002273660 PREDICTED: hypothetical protein [Vitis vinifera] | 487 | 6e-047 |
| AEC10971 hypothetical protein [Camellia sinensis] | 466 | 2e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q945Q5 At2g30700/T11J7.9 | 841 | 4e-088 |
| B9SX51 Putative uncharacterized protein | 445 | 3e-042 |
| C6TL42 Putative uncharacterized protein | 433 | 8e-041 |
| B9N601 Predicted protein (Fragment) | 416 | 8e-039 |
| B6SUS1 Putative uncharacterized protein | 370 | 2e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G30695.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 207 Blast hits to 207 proteins in 55 species: Archae - 0; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | 847 | 5e-091 |
| AT2G30695.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 207 Blast hits to 207 proteins in 55 species: Archae - 0; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | 847 | 5e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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