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Information for unigene UN13873

FASTA Sequence
Unigene ID: UN13873Length: 1563  SNP
GGCAAAATAATACTGTATTTATTGTTAACAAAAACCAAAGTAAAAAGAAGCAAAACAAACCAAAACCAAACATAAAAAGATCTCTC
GTCAGATAAACATAGAGAAAGAGGTTTGTTGTCGTTTTACATATTGACTCTGCGTCGGTTTGTCACCAACTCTGGATGTCCCTTCT
TCATCATCGCCACGAATTCTTCGTAGTTGATTTTTCCATCACGATCGGTGTCTACTTCAGCAATGATCTCTTTGATGGACTTGTCA
TCACCCATGTTGTATTTCTTCATGGCTTGCTCTAGCTCGTCCATCGTTATGTAGCCGCTGTTGTCCTCGTCGAAGTATTGGAAAGC
AGTGTACAAGTGATCCTCACGTTCGATTCTGTTCATATGCATTGTCGCTGATATAAACTCCAAGTAATCTATTGATCCATCTCCAT
CCATATCAGCTGCTTCCATTAACTGTTTGATTTCAGCCTCAGAGATCTTATTGCCAAGTTTGGGGAGACCAGTTCTCAACTCCTCC
AATGTGACTATTCCGTTTTTATCAGTGTCTAGAGCTTTGAACATCTCTTTCAGACCAATGATTTCTTCTTCCGACAGGTTCTCTGC
GATGACCTTGAGTGCCATTTTCTTGAGTTTGTTCATCGCTCGGAACTGTTTCATCCTGGATAACACAGCATTGTCAAGCGGTTTGT
CTGACGCCTCTCCGTCTTCTTTAATCCACGGATGGTTTAGCACTTCACTAGCTGTAAGCCGGTCTTTAGGGTCATAAGTCAGCATT
TTCTTCACAAGATCTTTGGCACCATTAGATACAGCAGGCCACGGGTCAGCTGAAAAATCAAGCTGTCCTTGTAGAATGGCATCAAA
GATCCCTGTCTCATTTTCTCCCCAAAAAGGTGGGACACCACTGAGAAGGATGAAGAGAATCACACCGGCACTCCAGATATCAGCCT
CTGGTCCATAGTTCCGTTTCAAAACCTCCGGAGCAACATAGTACGCACTTCCAACAAGATCCTTAAACTTATCTCCTGGTTTGAAG
AAGACGGAGAGACCAAAGTCAGTAGCTTTCAACGGTGAGCTCTCATCTTTGCTCAGAAAGAGAAAGTTCTCAGGCTTCAAATCTCG
GTGCATCACACCCATAGAGTGGCAACTATGCACAACCATCACCATCTGCCTGCACAAATCCGCAGCGGCTCTCTCAGAGTAATGAC
CTTTCGCTATGATCCTATCGAAAAGCTCCCCTCCTTCGCACAGCTCCATTATCAGATTCACCGACTGTCTGTCCTCGTAAGCTCCC
TTCAAGTCCACAATATTCCGGTGACCACTGAGATGGTGCATAATCTGGACTTCACGGCGAACATCTTCAATGTCGTCGCTCTGGAC
GAGTCGGCGCGTGGGGATCGACTTGCAAGCGAAGACTGTCTTGGTCTCTTTGTGAGTAACAAGGTACGTGACTCCGAACTGGCCAC
GACCAAGCTCGCGACCGAAGTCGTAGCTTCCCTTGACATCCTCCATCGGCTTGCCTAGGATCCGACCGTTCTTCTGAGCAGATGCG
TGGAACGGGATCCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACC91261 putative calcium-dependent protein kinase [Capsella rubella]23171e-258
XP_002867697 calcium-dependent protein kinase 6 [Arabidopsis lyrata subsp. lyrata]23052e-257
NP_194096 calcium-dependent protein kinase 6 [Arabidopsis thaliana]22847e-255
AAL38596 AT4g23650/F9D16_120 [Arabidopsis thaliana]22802e-254
XP_002509886 calcium-dependent protein kinase, putative [Ricinus communis]20411e-226

Swiss-Prot top hits (Blast detail)Scoree value
Q42479 Calcium-dependent protein kinase 322843e-256
Q9FMP5 Calcium-dependent protein kinase 1718238e-203
Q3E9C0 Calcium-dependent protein kinase 3418131e-201
Q9C6P3 Calcium-dependent protein kinase 3316973e-188
P28582 Calcium-dependent protein kinase16794e-186

TrEMBL top hits (Blast detail)Scoree value
B2WS89 Putative calcium-dependent protein kinase23177e-259
B9RCK2 Calcium-dependent protein kinase, putative20417e-227
B8ABY2 Putative uncharacterized protein20211e-224
A2ZVI7 Putative uncharacterized protein20183e-224
Q5ZE73 Putative calcium-dependent protein kinase20183e-224

Arabidopsis top hits (Blast detail)Scoree value
AT4G23650.1 CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase22842e-257
AT5G12180.1 CPK17; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase18237e-204
AT5G19360.1 CPK34; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase18131e-202
AT1G50700.1 CPK33; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase16973e-189
AT3G20410.1 CPK9 (calmodulin-domain protein kinase 9); calmodulin-dependent protein kinase/ kinase16751e-186

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  25%
 
84  50%
 
202  25%

Unigene MembersMember information