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Information for unigene UN13932
| FASTA Sequence |
| Unigene ID:UN13932 |
Length: 872 |
ATGTGAACTCTGTAGGGTACGTCATACGCTCACAGGCCACACGGATAAAGTATGTGCTGTTGATGTGAGCAAGTTCTCGAGCAGAC
ATGTTGTCAGTGCAGCTTATGACCGTACTATTAAACTCTGGGATTTGCAGAAAGGTTACTGTACTAACACCGTACTCTTTACTAGT
AACTGCAACGCGATCTGCCTCAGCATAGATGGCCTCACGGTGTTCTCTGGCCACATGGATGGGAATCTTAGGTTATGGGATATTCA
AACTGGGAAACTTCTGTCTGAAGTAGCTGGACACTCTTCTGCTGTGACCTCTGTATCCTTGTCCCGGAATGGAAATATGATCTTGA
CGAGCGGGAGAGACAACGTGCATAACGTATTCGATACACGGACTTTGGAAATTTGCGGGACGTTGAGAGCATCAGGGAACAGATTG
GCATCGAATTGGAGCCGGTCGTGTATAAGTCCGGATGATGAATACGTGGCTGCGGGATCTGCGGACGGAACGGTGCATGTCTGGTC
TATATCGAAAGGCAATATAGTGACCACTCTCAAGGAGCAAACATCTCCTATACTGTGTTGTTCTTGGAGTGGGATCGGTAAACCAT
TGGCATCGGCTGATAAAAACGGGTATGTCTGTACCTGGACATAATTGTTTGATTACTCAATACGTCTATGTTTCAAAGGGTGTCTT
TATACTCTGGTCTGGTCGTGTTAGTTTGATGAAGTGTTTTTGTATATAATTGGTTTTTTTAAATGTTCATTTGCTTCAAAAAGATA
TACAAATAAACACCCAATGCAAGTTTGCAGGGCTTTACGCTCAAACGTATTCGATAATGCGAATTTAGACTGTCTACGTCCACACC
GGTTTTCGTTTC |
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| GenBank top hits (Blast detail) |
Score | E value |
|---|
| XP_002865779 nucleotide binding protein [Arabidopsis lyrata subsp. lyrata] | 1091 | 6e-117 | | BAB09394 unnamed protein product [Arabidopsis thaliana] | 1087 | 2e-116 | | NP_199834 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 1087 | 2e-116 | | XP_002321652 predicted protein [Populus trichocarpa] | 954 | 5e-101 | | XP_002511279 Protein tipD, putative [Ricinus communis] | 934 | 1e-098 |
| Swiss-Prot top hits (Blast detail) |
Score | E value |
|---|
| O15736 Protein tipD | 404 | 1e-038 | | Q676U5 Autophagy-related protein 16-1 | 355 | 6e-033 | | Q8C0J2 Autophagy-related protein 16-1 | 352 | 1e-032 | | Q5RAC9 Autophagy-related protein 16-1 | 343 | 1e-031 | | Q5I0B9 Autophagy-related protein 16 | 340 | 3e-031 |
| TrEMBL top hits (Blast detail) |
Score | E value |
|---|
| Q6NNP0 At5g50230 | 1087 | 1e-116 | | Q9FGS2 Genomic DNA, chromosome 5, TAC clone:K6A12 | 1087 | 1e-116 | | B9IF20 Predicted protein | 954 | 3e-101 | | B9RAQ4 Protein tipD, putative | 934 | 7e-099 | | A9RG98 Predicted protein | 688 | 2e-070 |
| Arabidopsis top hits (Blast detail) |
Score | E value |
|---|
| AT5G50230.1 nucleotide binding | 1088 | 5e-119 | | AT1G18080.1 ATARCA; nucleotide binding | 215 | 9e-018 | | AT1G48630.1 RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding | 199 | 7e-016 | | AT3G18130.1 RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | 191 | 6e-015 | | AT5G23430.1 transducin family protein / WD-40 repeat family protein | 177 | 2e-013 |
| EST library breakdown for ESTs in the assembly |
| Unigene Members |
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