 |
Information for unigene UN13935
| FASTA Sequence |
| Unigene ID: UN13935 | Length: 1079 |
| SNP | GGCTACAGAGACAAAAGGAACTGTCTTGATCCATAGTGCTGAGCAGCTGGAGAACTATGCAAAGACAGAGGAAGCTAAAGTTGAAG
AGCTGATTAAAGCTGTTGCTGAATCAGGAGCTAAAGTTATTGTTAGCGGAGGATCAGTTGGAGAAATGGCATTGCATTTCTGCGAG
CGCTACAAGATTATGGTCTTGAAAACCAGCTCAAAGCTTGAACTAAGGCGTTTCTGCCGTACTGCTGGGGCTGTCGCTCATTTGAA
ATTAAGCCGGCCGAGTCCTGATGATCTGGGCTACGTTGATTCCATAGCAGTGGAGGAAATTGGTGGTGTGACAGTCACTATTGCCA
GAAATGAGCAAGGTGGTAACTCAATCTCTACAGTGGTTTTGCGTGGGAGCACAGACAGCATTTTGGACGACCTTGAAAGAGCCGTT
GATGATGGAGTTAACACATACAAGGCCATGTGCAGAGACAGCCGTATCGTTCCTGGCGCTGCAGCTACTGAAATAGAACTGGCTCA
GAGATTGAAAGAATATGCCAACGCAGAAACAGGGTTGGACAAATATGCCATCACCAAATACGCAGAGAGCTTCGAGTTTGTACCCA
AAACCCTTGCAGACAACGCTGGCCTAAATGCGATGGAAATCATTGCTTCTCTGTACACTGGACACGGATCTGGAAACACAAAGCTA
GGCATTGACTTGGAGGAAGGTGCCTGTAAAGATGTCTCAGAGACAAAAGTGTGGGATCTTTTTGCAACCAAGTTATTTGCTCTTAA
GTACGCTTCTGATGCTGCATGCACGGTGCTTCGCGTAGACCAGATTATAATGGCGAAACAAGCAGGTGGACCAAGGAGAGACCTCG
CAGCAGCCGCCGGTGCAGGCGCAGAGGAAGATTAAGGTTTTTTAATTCCTCGTAGTAAAAGTCTTCTTCTGTAACCTTTCTTTTTT
TAATTCTGGGAAGATTTTTGTCAGGCTCAGTTTGAGATTTGTGATCTTGTTTTGTACACAGACCATCAACTTAAGGTTTTGTTTTT
TGGTTTGCGATGTTCGGTTCTTCTCAACTTGAAATTTCCCGGCACCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566219 TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] | 1437 | 6e-157 |
| XP_002882322 hypothetical protein ARALYDRAFT_477651 [Arabidopsis lyrata subsp. lyrata] | 1434 | 1e-156 |
| XP_002871808 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1387 | 4e-151 |
| AAF05855 putative T-complex protein 1, theta subunit (TCP-1-Theta) [Arabidopsis thaliana] | 1334 | 6e-145 |
| ABK93043 unknown [Populus trichocarpa] | 1235 | 2e-133 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3ZCI9 T-complex protein 1 subunit theta | 754 | 4e-079 |
| Q4R5J0 T-complex protein 1 subunit theta | 753 | 6e-079 |
| P42932 T-complex protein 1 subunit theta | 752 | 8e-079 |
| P50990 T-complex protein 1 subunit theta | 751 | 1e-078 |
| Q5RAP1 T-complex protein 1 subunit theta | 751 | 1e-078 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94K05 At3g03960 | 1437 | 4e-157 |
| Q9SQR6 Putative T-complex protein 1, theta subunit (TCP-1-Theta) | 1334 | 4e-145 |
| A9P9J0 Putative uncharacterized protein | 1235 | 1e-133 |
| B9IPP6 Predicted protein | 1232 | 3e-133 |
| B9I5Y4 Predicted protein | 1220 | 6e-132 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
