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Information for unigene UN13940

FASTA Sequence
Unigene ID: UN13940Length: 1220  SNP
CAAGAAAAATGGATCAAGATAATATGGATAAAATGGAACGGACAAAGGGATACTACTTGGTCTAAAACCAAAATAATACATATAAA
AGGAAACAAAAGAGTTCTCTTCTTCTTTATCCCTCAAAACTTTCACCAAGAGGTCTGTCTAATCAAATTAACAATAAAAACAACAT
TAAACAACTTAGAGCTCATCGTGAGACTCATCCTCCTCTTCGGCCGCTCCTTCTCCACCAGCACCACCTGGCGCACCACCTGACCT
CTGATAAACGGCCGTGATGATTGGGTTACAAACTGCCTCTACTTCCTTCAACTTCTCGTCGTACTCTTCCTTCTCTGAGTTTTGGT
TCTCGTCAAGCCACTCCAAGGCTTCTTTCGTCGCTGCCTCAATCTTCTCCTTCTCGTCACCCTCAAGTTTGTCTGCGAGCTTGTCC
TTGTCGTTTATTTGGTTCTTCATGTTGTACACGTAAGTCTCGAGGCTGTTCCTTGCGTCGATTCTCTCCTTCACCTTCTTGTCTTC
CTCTGCAAACTCCTCTGCCTCCTTCACCATCCGGTCAATCTCTTCCTGGCTCAGACGTCCCTTCTCGTTTGTGATTGTGATCTTCT
CTGATTTACCACTTGCCTTGTCCTCTGCCTTCACGTTCAGGATACCGTTGGCGTCAACTTCAAAGGTAACCTCGATTTGAGGTGTT
CCTCTTGGTGCTGGTGGGATTCCGGTGAGGTCGAAGTTTCCGAGCAGTCTGCAGTCCTTGGTGAGACTTCGCTCACCTTCAAAGAC
CTGAATGGAGACGGTGGTCTGTTGGTCTTGGTATGTCGTGAACACCTGAGACTTCTTGGTCGGAATAACTGTGTTTCTCGGGATAA
GTTTGGTCATCACTCCTCCCACGGTCTCAATACCCAAAGTGAGTGGTGCAACGTCAAGAAGAAGGATGTCTTTGGTCTCGTCACCA
CCTTCTCCGCTCAGAATACCACCCTGAACAGCCGCACCGTAAGCAAACAGCTTCGTCGGGGGTTCACACCCTTGTTTGGCTCTTTC
CCTTCGAAGAAGTCCTTCAACAGCTGCTGAACCTTGGGGATTCTAGTACTTCCACCAACAAGGACAATCTCATCAATCTGACTCTT
CTGTAGACCAGCATCATCCATGGCCTTCTTCACTGGTCCCATGGTCTTCCTGAACAAGTCGTTGTTAAGCTCCTCAAAACGAGCTC
TGGTGAGAGGCTCTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA13947 luminal binding protein [Arabidopsis thaliana]13411e-145
NP_198206 Luminal-binding protein 1 [Arabidopsis thaliana]13411e-145
XP_002868566 hypothetical protein ARALYDRAFT_493781 [Arabidopsis lyrata subsp. lyrata]13258e-144
BAA13948 luminal binding protein [Arabidopsis thaliana]13185e-143
NP_851119 Luminal-binding protein 2 [Arabidopsis thaliana]13185e-143

Swiss-Prot top hits (Blast detail)Scoree value
Q9LKR3 Luminal-binding protein 113415e-147
Q39043 Luminal-binding protein 213182e-144
Q03685 Luminal-binding protein 512554e-137
Q03682 Luminal-binding protein 2 (Fragment)12448e-136
Q03684 Luminal-binding protein 412412e-135

TrEMBL top hits (Blast detail)Scoree value
Q0ZUG6 Putative luminal-binding protein13094e-142
A9UKE0 ER-binding protein12467e-135
D2D326 Luminal binding protein12413e-134
B9GL18 Predicted protein12395e-134
B7U9Z3 ER luminal-binding protein12378e-134

Arabidopsis top hits (Blast detail)Scoree value
AT5G28540.1 BIP1; ATP binding13423e-148
AT5G42020.1 BIP2; ATP binding13226e-146
AT1G09080.1 BIP3; ATP binding9841e-106
AT3G12580.1 HSP70 (heat shock protein 70); ATP binding8494e-091
AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)8486e-091

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  13%
 
1011  46%
 
122  8%
 
64  17%
 
72  8%
 
92  8%

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