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Information for unigene UN13945

FASTA Sequence
Unigene ID: UN13945Length: 1353  SNP
GATTCCTATAGTTACATTGACTCTGAGTCTGATGATGGATCAAATTGTAGTGTTTTTGAAGATGCAAATCCTTCTGGGATGGGACA
ATTGATTCAGTATGAAGAGTTCTACGAGAGTTACCTGAAAATAGATGGGAACAAAGCTGAGACATACTCAAGCAAGAATGAAGTCA
GCATAAAGAGAGACCAAATTGCTGATGAATGTCACCAAGAAACTGTCAAGACTACTACTTGTCAAGAACATCAAGATCACAATAAG
AGATCATCAAAAGTTGTTATGGTTTCGGTTCGAAGAACATCTATTGACAGAAAATCAACATCATCTGAATTATACCGACCAAAAGC
CGGTTCTGTGATTCAACGTTCTTTGGGAGAGAAGCTGAACAATCAAGGGAGCTGGTTAGAACTTGCTCCATCGAATTTCAAGCTAC
GTGGATTGAGCTTCTTCAGAGACAGACAAAAGAATCCAGCACCAAACTGTAGTCCATACACACCAATCGGAGTCGATCTTTTCGCG
TGTCCTAAGAAGATAAACCACATTGCTCAACACATTGAGCTCCCTAACTTGAAACCAACGTCATCACAAGTCTGTGATGTCCCTAA
TATCTTGATTGTGAACATCCAGCTTCCAATGTATCAGACCTCTATGTTTGGTGACTATGATGGTGAAGGACTTAGCTTAGTCTTAT
ACTTCAAACTGAATGAGAATTATCACAAAGAGATCTCATCTCACTTTCAAGACACCATCAAGAGATTTATGGATGATGAGATGGAG
AAAGTGAAAGGATTCACAAGAGAATCAATAGTGCCATTCAGAGAGAGGTTGAAGATCTTGGCCGGTTTGGTGAATCCTGACGATCT
TCAGCTATGTTCTACTGAAAGGAAACTTATCACAGCTTACAATGATAAACCTGTTCTTTCTCGTCCCCAACACGATTTCTTTAAGG
GACCAAACTACTTCGAGATCGATTTGGATATACACAGGTTCAGTTACATATCGAGGAAAGGACTGGAATCTTTCAGGGATAGGATC
AAGAATGGGGTTCTTGATCTTGGTTTAACTATTCAGGCTCAATCACCAGAGGAACTTCCAGAGCAAGTACTGTGTTGTGTCAGGTT
GAACAAGATTGATTTCGTGAATCACGGACAGATCCCAACGCTTTTAACTAACAAACAATGATGAGTGTCCCCATCTAATTCACTAC
GAAGAGACAAAACCAAAACAGAGAACCTTCTCACTTATTTGTATTAAAGAGACATTAAGTACAAATCAATGTCTTTTTTTTGGAAA
CCATAGAAGCAATATTTGCTTTGAAGTATATTTATATCTCATGAAAAATATTGATTTGCACAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892781 hypothetical protein ARALYDRAFT_471558 [Arabidopsis lyrata subsp. lyrata]17991e-198
NP_172850 uncharacterized protein [Arabidopsis thaliana]17981e-198
AAF79412 F16A14.19 [Arabidopsis thaliana]17981e-198
XP_002512135 conserved hypothetical protein [Ricinus communis]11573e-124
XP_002530022 conserved hypothetical protein [Ricinus communis]11044e-118

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LMG0 F16A14.1917989e-199
Q9XI89 F7A19.6 protein17989e-199
B9RCY7 Putative uncharacterized protein11572e-124
B9SVK3 Putative uncharacterized protein11043e-118
Q9ZR99 Gb|AAD00543.110712e-114

Arabidopsis top hits (Blast detail)Scoree value
AT1G13970.1 unknown protein18334e-205
AT5G39430.1 unknown protein10719e-117
AT3G29180.1 unknown protein10638e-116
AT1G59650.1 CW148371e-089
AT1G10410.1 INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: CW14 (TAIR:AT1G59650.1); Has 144 Blast hits to 144 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).7814e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  63%
 
121  13%
 
82  25%

Unigene MembersMember information