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Information for unigene UN13952
| FASTA Sequence |
| Unigene ID: UN13952 | Length: 961 |
SSR | SNP | GGTAGAGAAAATAAATAATCGATACAACACCGCAGGATAATGTAATTTGAAGCTTTTCAGAACGAGATTTAGATGTCATAAGATCC
ACAAAGGTAAAACAGTCTTACACATTTTTTTTTATTTGATTGAGTTTGCTTCTTCCAACTTAAAGCTATATATACGACTCTCATAA
AACCCTGAAAAAAATCTTCACCGAGAAAAACGCTGCTTCATTGCCTTTAGTCCTCCTTTGCAGCATCACCATTTGCAACATCCTTC
TTCTCCGTGGTTTCTTCCGTTTTCTCTTCTATGCTTGTAGAAGTCTCACCGTGGGCAACCGCGGAAGCTTCTTCTGCTTCTTCTCC
GGTGTTTGTAGCAGGTTCCGAGTCTGCTGCACTTTCTTTGCCTTCTCCATCACTCTTCTGAATGGTCCCGACTTTGACATACTTGC
TCATGAACTTGTACTCCCAGTCTTGTAACGCATCTAGCTCAAATGGACCTAGACCCGAGATGTCTCCGGTCAAATCGGATTCCTCG
AAGGACATCTTAGCAAGAGCTCGGCTTGCATCTTTCCCTGCAAACAGAGCGTATGGTCCACCTGGTCCATAGAACATCCTGCTCTG
GGAAACATCGTAGATCTGGCCTTTGATGGCCATGAGAAGGGGGTTTTTGGGATCGGAGCCGTCGTACTTCTTAAGCTCCTCCTCCG
TGATTTCTCCGAGCTGAACCGGAGGCGGTAGGGGCTCAGGCTGAGGGTAATCCTCCGTTGAACGAGGACGGTGTTCCTCGGGGGAG
ACGAAGAAACCGGAGACGACTTGGTAGACGGCGAAAGCGAGAGCCAAGACGGTGAAAAAGGCAGCCGGAGAGAGTCCGGTGTAAGC
TGTGATTGTTTCCTTGACCGTCTCCCATAGTTCAACCACCATGATTAAAGGAGAGAAGAGATAGATAGAGAGAGAGAGAGAGATAA
TCGGTGACTGGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_190458 membrane steroid-binding protein 2 [Arabidopsis thaliana] | 928 | 6e-098 |
| XP_002875931 membrane-associated progesterone binding protein 3 [Arabidopsis lyrata subsp. lyrata] | 924 | 2e-097 |
| AAD34615 putative progesterone-binding protein homolog [Arabidopsis thaliana] | 845 | 2e-088 |
| EAZ16597 hypothetical protein OsJ_32072 [Oryza sativa Japonica Group] | 738 | 6e-076 |
| XP_002510808 steroid binding protein, putative [Ricinus communis] | 737 | 8e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9M2Z4 Membrane steroid-binding protein 2 | 928 | 2e-099 |
| Q9XFM6 Membrane steroid-binding protein 1 | 696 | 2e-072 |
| Q9SK39 Probable steroid-binding protein 3 | 264 | 2e-022 |
| O55022 Membrane-associated progesterone receptor component 1 | 257 | 2e-021 |
| P70580 Membrane-associated progesterone receptor component 1 | 255 | 3e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A3C684 Putative uncharacterized protein | 738 | 4e-076 |
| B9R9D3 Steroid binding protein, putative | 737 | 5e-076 |
| Q9FVZ7 Membrane steroid binding protein 1, putative, expressed | 733 | 2e-075 |
| B6TD62 Membrane steroid-binding protein 1 | 732 | 2e-075 |
| A2Z932 Putative uncharacterized protein | 729 | 5e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G48890.1 ATMP2; heme binding | 928 | 2e-100 |
| AT5G52240.1 MSBP1 (membrane steroid binding protein 1); steroid binding | 696 | 2e-073 |
| AT2G24940.1 AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2); heme binding | 264 | 2e-023 |
| AT4G14965.1 AtMAPR4 (Arabidopsis thaliana membrane-associated progesterone binding protein 4); heme binding | 186 | 2e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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