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Information for unigene UN13959
FASTA Sequence |
Unigene ID: UN13959 | Length: 994 |
SSR | | GTGAAATGTAATAAGTGATCATCCAATAGATACATAAGGTTGAAGAGTTTGTCTTTTACAAGATATTTTCTCCCCCATCTCTTCTT
ATGTTGAATCATTTTCATAAAAGTACAAAACATTGTTTCACATAAATATCCAAGGAGATATAAAAGCAAGAGATATTTCTATAAGT
CTAACATGTAGACAGAAAGATCTCTGACAACAATAATAATAATTCAATAGAGTACTGCTCAGTGCATAGATATTTTGTAATGTTTT
TTTTGATTAAGGACCCCCACCCATCAAGAGAGAGAGAGGTATCAAGATTCTGCAATGGGGAAAGCTGAGCCAATACGGTTGTTGCC
AAGTCGGTAGCATTTGACATTGACACTGTATGGACCCAACTGAATGTGGTTGTCTTCCCTTCCCATGAAGAAACACATCGTGTACA
GAGCCAACTCGAACTCTGGACTTACTCCAACTAGTGTACTTGACACTGACTTCAAAACACCGTTCCACTCGAACTGGATCGTTAGC
AGCTGAGTTTCTGAATCAGGAATTTCACCACGACGACGGGGGAATATATACCCTTGGTAATCAACTGATCCTTTGGCTTCTTCTAG
GTAGAACTGAAGCCAGTTATGGAAGCCAGAGACTTGTTCTCCACCACACTGTTTGATCTCACCTACAAAGACATGCTCAAAGGCAG
AAGAGGAGCCAGAGGTGCCTCCACGTCCATAGAGATCGAACCAGAGACTGGTCAGCATTCTCTTGAACTCTTGGTAGCTTCCAGGA
GCAACGTCCTTGATCGCAAGGTACTTGTGAAGGTACTTAACAACAGCGGTTCTGCTGATCTCTTCGACGAAAGCCGCCTGCTCTTG
CCTCTCTTCTTCGGTGACAACTTCTTTGTAACCTTCGTGCGGGTAGTAGTTGTCGAGCAACGAGCAGAACCTATCGAACGTCGGTT
TTCTGAAGACCTCCTCGCTCACCCAAGAGAAGAGTAACCCTTCAGCCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002868084 hypothetical protein ARALYDRAFT_915009 [Arabidopsis lyrata subsp. lyrata] | 1157 | 2e-124 |
NP_193443 uncharacterized protein [Arabidopsis thaliana] | 1146 | 3e-123 |
NP_001190746 uncharacterized protein [Arabidopsis thaliana] | 1146 | 3e-123 |
XP_002517514 Placental protein 11 precursor, putative [Ricinus communis] | 986 | 1e-104 |
XP_002282850 PREDICTED: hypothetical protein [Vitis vinifera] | 978 | 9e-104 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q503V9 Poly(U)-specific endoribonuclease-B | 485 | 6e-048 |
B1H3D5 Poly(U)-specific endoribonuclease | 442 | 6e-043 |
B1WBB4 Poly(U)-specific endoribonuclease-B | 441 | 8e-043 |
Q8JFY9 Poly(U)-specific endoribonuclease-A | 438 | 2e-042 |
P21128 Poly(U)-specific endoribonuclease | 436 | 3e-042 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8RWB6 Putative serine protease-like protein | 1146 | 2e-123 |
B9RUR9 Placental protein 11, putative | 986 | 8e-105 |
A5AGJ0 Putative uncharacterized protein | 976 | 1e-103 |
B8ASM0 Putative uncharacterized protein | 956 | 2e-101 |
B9FGE4 Putative uncharacterized protein | 956 | 2e-101 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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