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Information for unigene UN13967
| FASTA Sequence |
| Unigene ID: UN13967 | Length: 1078 |
| SNP | GGATCGACATTTTGAGTCAGCACTCACCAGCAAACTCAAATCCCCACAAAAGGGAAGAAAATCATCCAAAAAAAAAGAAAACTCAA
AATCAAAATCAGACGATGCTTCTCCGAACTACTCTCCAGCAAGGGAAAAACAACCTCAGGCCTCGTTTTCTCCGTTGTTTGTTATC
AACTATGTCATCATCTACTCACCCTCCTAGAGTACCAAATCTTATTGGAGGATCTTTCGTTGACTCTCAAGCATCTTCACATATCG
ATGTCATAAACCCTGCAACCCAAGAAGTTGTTTCTCAAGTACCATTGACAACTAAGGATGAGTTCAAGGCCGCTGTGTCCGCTGCG
AAGCAAGCTTTTCCTTCTTGGAGAAACACCCCCATCACCACTCGTCAGCGTGTTATGCTCAAGTTTCAAGAACTTATTCGCAAAAA
CATGGATAAACTTGCTTTGAGCATTACAACCGAGCAAGGGAAGACCTTAAAGGATGCACATGGTGATATCTTCCGTGGGCTAGAGG
TTGTGGAGCATGCTTGTGGAATGGCAACTCTACAGATGGGTGAATATGTCCCCAATGTGTCAAACGGAGTCGATACGTATAGTCTT
AGGGAGCCATTAGGTGTATGTGCTGGCATTTGTCCTTTCAACTTTCCTGCTATGATTCCTTTATGGATGTTTCCCATTGCGGTGAC
ATGTGGCAATACCTTTGTCTTAAAGCCATCAGAAAAGGATCCTGGTGCTTCTGTAATGCTTGCGGAGCTCGCAATGGAAGCTGGAT
TACCTGACGGGTTCTCAATATCGTTCACGGTACCAATGATACTGTGATGCTATCTGTGATGATGATGATATCAGGGCTGTCTCCTT
TGTTGGCTCAAACACTGCTGGAATGCATATATATGCAAGAGCAGCAGCCAAAGGAAAACGTATTCAGTCAAATATGGGGGCGAAAA
TCATGGAGTTGTCCTGCCTGATGCCAACGTCGACGCTACTTTGAATGCGCTACTTGCTGCTGGATTTGGTGCCGCTGGTCAGAGAT
GCATGGCTCTGAGTACAGTTGTCTTTGTGCAGTTCAAATCATGGGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179032 Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis thaliana] | 1139 | 2e-122 |
| NP_001077888 Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis thaliana] | 1139 | 2e-122 |
| XP_002885906 ALDH6B2 [Arabidopsis lyrata subsp. lyrata] | 1127 | 6e-121 |
| NP_001077887 Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis thaliana] | 1116 | 1e-119 |
| ABK95002 unknown [Populus trichocarpa] | 1089 | 1e-116 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0WM29 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial | 1139 | 1e-123 |
| Q02252 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial | 740 | 2e-077 |
| Q02253 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial | 739 | 2e-077 |
| Q9EQ20 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial | 731 | 2e-076 |
| Q07536 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial | 719 | 5e-075 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MQH4 Uncharacterized protein At2g14170.3 | 1139 | 2e-122 |
| A8MQR6 Uncharacterized protein At2g14170.2 | 1116 | 7e-120 |
| A9PF49 Putative uncharacterized protein | 1089 | 1e-116 |
| B9RX74 Methylmalonate-semialdehyde dehydrogenase, putative | 1077 | 2e-115 |
| B9GH76 Predicted protein (Fragment) | 1074 | 5e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G14170.1 ALDH6B2; 3-chloroallyl aldehyde dehydrogenase/ methylmalonate-semialdehyde dehydrogenase (acylating)/ oxidoreductase | 1145 | 2e-125 |
| AT2G14170.3 ALDH6B2; 3-chloroallyl aldehyde dehydrogenase/ methylmalonate-semialdehyde dehydrogenase (acylating)/ oxidoreductase | 1145 | 2e-125 |
| AT2G14170.2 ALDH6B2; 3-chloroallyl aldehyde dehydrogenase/ methylmalonate-semialdehyde dehydrogenase (acylating)/ oxidoreductase | 1122 | 8e-123 |
| AT1G79440.1 ALDH5F1; 3-chloroallyl aldehyde dehydrogenase/ NAD or NADH binding / succinate-semialdehyde dehydrogenase | 318 | 1e-029 |
| AT1G23800.1 ALDH2B7; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) | 271 | 4e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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