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Information for unigene UN13975

FASTA Sequence
Unigene ID:UN13975 Length: 2403
GGTCAGACCAATCACTTTTTTAAAAGATTTTATACTAGACTATTTTTCGATTTTTTTTTATTTCATATTTCCACTTCAAGTATAAA
AAGAAAATATATCGATTTTTTTTATAGAATTGTGATTAGAATATGAATATAAATGTAAAATAAAAAAATGATATAAAATGCTATAA
AAAAAAATAAAAAATCTTATAAGCTAGTCATACAATTTGATTATATTGACAATTTTAAAAAACTGATCATACTATGATCATAGTAT
GATGGCGGTTGAGCAAGTATGCCCCCATCGTCTAGTGGTTTAGGACATCTCTCTTTCAAGGAGGCAGCGGGGATTCGACTTCCCCT
GGGGGTAGGGTACTACGAAAGGAAGTTGATCATGGATTATCCATAAAGTTCGAATAGATTCTTCCTGGGTCGATGCCCGAGCGGTT
AATGGGGACGGACTGTAAATTCGTTGGCAATATGTCTACGCTGGTTCAAATCCAGCTCGGCCCAAAAATTCGCTGTCTACATAACC
CTTTTTGTTTTGCATAAATGACAGAGAAGGGTAAGAAAAAAGTAAAATTTCTGGGTATATTTCGACTTTACTTTTTTCTTTATTTC
TTGTGTCTCGTTACTTTTTGTTTCCATAAAAAATTCCGATCTTGATCTTGCTAAGGGTCCCGAGATGGATCCATTAAATATAAACT
TTAATGAACAGAGTCGAAAAAAATAATCTTTTTTTTACAATAAAAATTACAATCAAAAATAGGTTATCAATCAATTTTATAATAAT
GCAAGGATTACTAGTAATCGGCCTTGCTATCACTAAAGTGATATCCATATAGATATCAATATATTACTTGTGACTTTCTTTGTTAC
AAAACACTAATTTGAATCTAAAATTTAAATGATTAAGATTAAATCATAAGAAGGAATATGTAAGCTACCCGCTTTATTTCCATGGG
ATTGTAGTTCAATTGGTCAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAGCCCCGTCAGTCCCGGCGGATTCAATAAAA
AAAAAGACATAAACTCCCCTTTTTTTTTTCTGGGCAAGGGGATCAAAATGGTTTCGGTTATCTTTTTGTTTTATTTTTCTTTTTTC
ATCAAGCAAAAGAAAGGGGTATTTCTGTAGCACCAATTTAAAGACATATGTAAATTAGTATAATTATAATTATTGAGAGCATTCAC
CACTTCAAGAACGAGATACTGTATGGGGTTTCCTCTTTTTGTCAATTAATCTCCCATTAACTCGTGTAGGAAAATGAAATAGGATA
GCGTATAATACGTTTGGCCAAGAGTACCTATATATACTTTTGTTTCTATGAAGTCAAGGAAGTTAAAATAGTTCGAATCCAACCAA
GTAAAGAGGATATTTAAAAAATAAAGATCAATTTAGTCTTCCCTAATGAATATGCTCTTTTTAAAAAGTTGATGTCGAAGAAAAAC
TCGTAAGAAAATTTAAAGAGTTAATTTTTTGGAATATTGTAGTTTTTTTTATCGGGACTCGTCTTTATCACATTTCCTTTGTTTTA
CAAAAAGATCATAGACCCTTACAAAATTTTTTAAATTTCAATTTGAAATTTCGTACTTGTTTTCTCTATTTGATTTCTATTGTTTA
TTTAAGGTTCTTTAGAAACTCTTTTTGTAAACAATCGAAGTAGAAAAGGTTTTTTATGATATTTCATCAGATGATTGTACAAGGAA
AGTAATAGGTTGTAGAAAAGAAAGCGGTGAAAAAGAATCATAAATAAATAGTTTTTTATTGGATCAGGAATCTCATTATGTATTCG
GTGTGGATAAAAGATCTTCCTATGTTATACTATTAAATTCTTGACGATGAATCGATTTTATAGCTCCGATATTGTTATTCATGATA
TTTCTTTCATTCGATATCATCGAAATCTAATTCATCTGAGTGAGTTTACAAGCGAAAGATTTCTCATCTCTATGGGATTAAATCCC
GAGATATTCCAAAGAAAAAAAAATAAATAATAAACTATTTAATTATGGAAGTCAATATTCTTGCATTTATTGCTACTGCACTCTTC
ATTCTCGTTCCTACTGCTTTTTTGCTTATAATTTACGTAAAAACGGTTAGTCAAAATAATTAATTTGAATACAATTTGACTATCAA
TGTAAAAAAAAGAGATGTCAATTTCTCGTCTTAAATGAGAAGATATGCATCTGGTAGCACCTGGGGCCGCTGAATTTACAAAACAT
CTAAGTTTATTTTCATACAATAAAACAAAGCATTTATCTACAGTGAAGAGTTACAATGTCGGCATCCAAATTTACTATATTTTGTA
TTGTTCTGGTTTGTTTTTCTAGTTTTCATGAATGTAAGTCATATATCGCTTACGGTCCATCCAATCCTTTAGCATCATTAC

Annotation(GO term)
GenBank top hits (Blast detail) ScoreE value
XP_002888353 hypothetical protein ARALYDRAFT_893970 [Arabidopsis lyrata subsp. lyrata]2193e-015
XP_002318750 predicted protein [Populus trichocarpa]1907e-012
XP_002888366 hypothetical protein ARALYDRAFT_894017 [Arabidopsis lyrata subsp. lyrata]1612e-008
YP_398315 photosystem II reaction center M protein [Lactuca sativa]1612e-008
XP_002886862 hypothetical protein ARALYDRAFT_893969 [Arabidopsis lyrata subsp. lyrata]1593e-008

Swiss-Prot top hits (Blast detail) ScoreE value
A4QK12 Photosystem II reaction center protein M1617e-010
A0A329 Photosystem II reaction center protein M1617e-010
A4QL13 Photosystem II reaction center protein M1617e-010
Q56P14 Photosystem II reaction center protein M1617e-010
A4QLI8 Photosystem II reaction center protein M1617e-010

TrEMBL top hits (Blast detail) ScoreE value
B9I3U9 Predicted protein1905e-012
A9QC61 Photosystem II protein M (Fragment)1611e-008
B3TN40 PSII low MW protein1611e-008
D1L8N2 Photosystem II protein M1611e-008
D3WEE7 Photosystem II protein M1611e-008

Arabidopsis top hits (Blast detail) ScoreE value
ATCG00220.1 PSII low MW protein1572e-010
AT3G20362.1 unknown protein1562e-010
ATMG01060.1 hypothetical protein1356e-008


EST library breakdown for ESTs in the assembly
 
10 3    7%
 
18 1    2%
 
7 18    39%
 
9 1    2%
 
12 1    2%
 
6 13    28%
 
8 5    11%
 
11 4    9%

Unigene Members
Unigene image