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Information for unigene UN13982

FASTA Sequence
Unigene ID: UN13982Length: 1220 SSR 
GCATATGAGCAAGTTTGATTAATGAACTTGGAAATATGTTTCTGGAAACAAACCAATTAATTATACAGCAAATTCAAATGAGAAAT
AGGGGCTAAGTTGTTATGGTGGGATAGAAAGAGCTAAGAACTAGCCAAATAAAGATGAGGGTAGTAAGAGTTTCTTACTACAGGCT
ACACTCTCTACAAATAGAACATTTAAGATCGTGCTCTTTTGTTGCTACATGCAGGGCACTTGTACTGTTTGATATGCTCAGCTCTA
GCTGGAGTTATCTTCACACACTTCCCGTGGAACCATACCTCACAAACGTCACAGCAGATCCAGAAATCATCAGTACCAGTACCATC
ACCGTCTCCACAGGCACCACAAAGGGTTTCCCCGTGTTCATCCTCATCCTCTTCCTCTGATCCATCTTCCTCATTGTTTGCCTGCA
TGGCCTTTGAGCTTTTGCCATCTGAAGATCTCACTTTGGAATCCGACTTGGATAGATTGCCATTTCGATTTGAAGCAGAGGACTTT
TCCTTAGTTTGCTTTTTCATATTTCCAGTGACTACTTCAAATATGGTAGGAACCCCATTGATCATATCAAACAAGCGTTTCCTCTC
ATATTTGTCGAAAGCGTATCTGGAGCCGAAGTAAAAAGAGACGGAGAGCAACCAAGTGTCACTGTGGATAGCAACAAGAGAAAGCC
ATTCCTTCTCAGAGAGTCCATCTCTTGCAAAGTTAATGCCTAGAGCTGGCTCTGGAAGCTCCGGAGGCACTTCTTCTGCTGGTAAG
TTCACTTCCCATTGTTCGTTCGGTAACCCATACAAGCACAGATTCTCCTTCTCTACAGTAAAAAAACAAAACAAAAAAATCTGAGT
CAAATTAAGTGCAAAAATGGGAAGAAAATCGAGAAACCCTAACCAGGATCGCATTGCTGGTAAAACTCTGCAACATCTGCAAAAGA
GGCGAATCAATTAGATCGGAGATGAAAACATCATACAAACAGATCCAAACACGATATTAAACCCAGAAATATTTTTAAAAAATAAT
CAGATAAAAATTGAGAGAGAGTACCGGAGGTGAGAGCTTTGACAATGGCGGCTCTACGGCCTTTGAAATCCCTGAAAACTTCTTCG
ACAGTGCGAGGATTGTAGACACCAGCTCCTCCTTCCATATCTCTCTCTCTCTCTCTGGTTTGGATCCTTTTTTTTTTAAATTAAAT
CGAGAAGACGCCGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABA18096 PHD finger/nucleic acid binding protein [Olimarabidopsis pumila]9493e-100
XP_002873999 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]9072e-095
XP_002324777 predicted protein [Populus trichocarpa]8785e-092
XP_002308535 predicted protein [Populus trichocarpa]8769e-092
CAN62945 hypothetical protein VITISV_002230 [Vitis vinifera]8732e-091

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g262108219e-087
Q9W0T1 Nucleosome-remodeling factor subunit NURF3011362e-007

TrEMBL top hits (Blast detail)Scoree value
Q287W1 PHD finger/nucleic acid binding protein9492e-100
Q9M2B4 Nucleic acid binding protein-like9034e-095
B9IKC9 Predicted protein8784e-092
B9HD31 Predicted protein8766e-092
A5AXB1 Putative uncharacterized protein8731e-091

Arabidopsis top hits (Blast detail)Scoree value
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding9193e-099
AT5G20510.1 AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding8702e-093
AT5G26210.1 AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding8226e-088
AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding7582e-080
AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding7374e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  25%
 
61  25%
 
122  50%

Unigene MembersMember information