RadishBase

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Information for unigene UN14001

FASTA Sequence

Unigene ID:UN14001

Length: 1079

GGATTCACACAGATCTAATCTGAACCCAAAAAGTCATATTGGGTTGGAAAAATGATAGAAAGTGCCAATGGTTTTACTTTGACTGA
TAGAGATTGGCTTAGAATATTATTATATGAAGAGCTGATAGAGAGTACTAACTCAACTTGATTACAAACTGAAACAAAACAACTCG
AGAGGAAAGAAGATGTCTACTTCTGAACAATCTCTCTCATCGTACAACGTTTTCGTTTACGGCAGTTTCCAGGAGCCAGCCGTTGT
GAGTTTGATTCTAGAGTGCACTCCGGTCATCGTCTCCGCCCAACTCCATGGCTTTCATCTTTATCGACTCAAAGGACGTTTGCATC
CTTGTATTTCTCCTTCTGAGTCCGGACTAGTCAACGGCAAGGTACTAACTGGCTTAACAGAAGCTCAGTTAAAGAATTTAGATATG
ATTCAAGGAGCTGAATACGTGAGGAAGACTGTTGAGGTTGTTTTAACTGAGACATCCGAGAAAATGCAAGTGGAAGCTCTAATATG
GGCCAACAAGGATGATCCAGACATGTATGGAGAATGGGATTTCGAGGAGTGGAAACGGCTTCACATGGATAAATTCATAGAGGCGT
CAAAGAAATTCATCGAATGGAAGAAGAATCCAGATGGTAAAACAAGGGAAGAGTTTGAGAAATTTGTACACGAGGATCGTCCTCCT
GTGGTGTGAAGAATATGTCTGCCTTTTCTTGATATCTTAATCGTTTACCACAAAATAGAAAGGTCTCTCACTTCAACTTCAAGTGC
AATATAAGATTATAAGTTCTAGTACATGATCATTGAGTTGTGGATCAGTTCGTAACACAAGGTGATCAATGTTGTCGTATCTACTT
CATGAACATTGAGTTGCATTGCATGTTATTGTTTTTATCGTTTCTAATCATTATGTCATCAATCGACCTGGTCTGGTAAATACGCT
TAAACGTATCTAAAATTGTACTTGTTGATAGAAAAAAAAGGTGTTCAAGAAAAAAAAAATTGTACTGGAAAGGAGAAAGAAAATCT
AGTTTTAAATGGAATAAAGTAAGAAAGTTTTCACTTTTATCATTTAT

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
BAJ34156 unnamed protein product [Thellungiella halophila]	762	1e-078
XP_002877143 predicted protein [Arabidopsis lyrata subsp. lyrata]	733	3e-075
XP_002877144 hypothetical protein ARALYDRAFT_905179 [Arabidopsis lyrata subsp. lyrata]	722	5e-074
NP_566840 AIG2-like protein [Arabidopsis thaliana]	720	9e-074
NP_189535 protein AIG2 [Arabidopsis thaliana]	719	1e-073

Swiss-Prot top hits (Blast detail)	Score	E value
P54121 Protein AIG2	719	5e-075
Q9FIX2 AIG2-like protein	486	5e-048

TrEMBL top hits (Blast detail)	Score	E value
Q9MBH2 AIG2 protein-like	720	6e-074
A8IXP4 Avirulence-responsive protein-related protein	490	3e-047
A2RVP6 At5g39720	486	8e-047
Q8LBI2 AIG2-like protein	485	1e-046
Q9MBH1 AIG2 protein-like	484	1e-046

Arabidopsis top hits (Blast detail)	Score	E value
AT3G28940.1 avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putative	720	3e-076
AT3G28930.1 AIG2 (AVRRPT2-INDUCED GENE 2)	719	5e-076
AT5G39720.1 AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN)	486	5e-049
AT3G28950.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related	484	8e-049
AT5G39730.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related	483	1e-048

EST library breakdown for ESTs in the assembly


6	2			17%


11	1			8%


12	2			17%


9	3			25%


21	1			8%


8	3			25%

Unigene Members