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Information for unigene UN14012

FASTA Sequence
Unigene ID: UN14012Length: 946 SSRSNP
CTGGAAAGAGATACATAAAATTGGGTGGTTGTTGCCGACGACGCGTCTTTTTGGGTTCTCTCTGTCTTTTGATCTTCAAATCTCCT
TTCCTCCATCCCACGAGCTCTCTCTCTCTCTCTCTCTTGAGCTCAATCATGGCTACCACCGCTGCAAACAAGACCATTAACGCCAA
ATTGGTGTTGCTTGGAGATGTTGGCGCTGGGAAATCGAGCCTTGTGTTACGGTTTGTTAAAGATCAGTTTGTTGAGTTTCAGGAAT
CAACCATCGGTGCAGCTTTTTTCTCACAAACACTAGCTGTCAACGATGCGACTGTAAAGTTTGAGATATGGGATACAGCAGGTCAG
GAACGGTACCATAGTTTGGCTCCTATGTACTACAGGGGTGCTGCTGCTGCTATCATTGTCTTTGACGTTACAAACCAAGCCTCGTT
TGAGAGGGCAAAGAAATGGGTTCAGGAACTTCAGGCACAAGGTAACGCTAATATGGTGATGGCCCTTGCTGGAAACAAATCTGATT
TATTAGATGCAAGGAAGGTTTCCGCAGAGGAGGCACAAACATATGCTCAGGAGAACGGTCTTTTCTTCATGGAAACTTCAGCAAAA
ACCGCAGCTAATGTCAAGGAGATATTCTATGAAATTGCAAGAAGGTTACCGAGAGTACAACCAACAGAAAACCCAACAGGAATGGT
TCTACCAGATAGGGCCATGGATAGGGCAGTGAGTTCATCTTGTTGTGCTTAGTTATATGTAATGGAATACACTTCCCTTAAAGGGG
ACCTTCTGGTCAGTCAACATTGAGTTATGGACTTCTGTGTTTTGCATGTCTTTGCTTTGTTTTGCTTGTGTGGACATTTATTTTAC
CAATTAAAAAGGGTTGTAAATGAAGATATTTCATATTGAGATATGATGTCTAGCTCATATTGGAACTATGTATGTATCCAATTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867930 hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp. lyrata]9733e-103
NP_193699 Ras-related small GTP-binding family protein [Arabidopsis thaliana]9653e-102
NP_199326 Ras-related protein RHA1 [Arabidopsis thaliana]8991e-094
CAA50609 ras-related GTP-binding protein [Nicotiana tabacum]8668e-091
ABK92976 unknown [Populus trichocarpa]8641e-090

Swiss-Prot top hits (Blast detail)Scoree value
P31582 Ras-related protein RHA18996e-096
P31583 Ras-related protein RHN17921e-083
P29687 Ras-related protein Rab57732e-081
P51148 Ras-related protein Rab-5C6102e-062
Q5R7L7 Ras-related protein Rab-5C6102e-062

TrEMBL top hits (Blast detail)Scoree value
Q9SN68 AT4g19640/F24J7_1909652e-102
Q40570 Ras-related GTP-binding protein8666e-091
A9P9C3 Putative uncharacterized protein8641e-090
B9NA46 Predicted protein8631e-090
B9ICG5 Predicted protein8541e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G19640.1 ARA7; GTP binding9669e-105
AT5G45130.1 RHA1 (RAB HOMOLOG 1); GTP binding9004e-097
AT3G54840.1 ARA6; GTP binding / GTPase5223e-053
AT1G09630.1 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding4022e-039
AT5G10260.1 AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding4004e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
88  50%
 
93  19%
 
103  19%
 
72  13%

Unigene MembersMember information