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Information for unigene UN14021

FASTA Sequence
Unigene ID: UN14021Length: 911 SSR 
TCCATGCGTACATCTTTGGCCCGTGCAAAGCAGCACCCCCTCCTTAAGGGATTAAACGTCTGCATAACTCCCAACATTAAACCGGA
CAGAGGTATGATTGCTCACTTAGTGAAGTTGACTCAAGGGCAGGTAGTGGAGATAAGTGAAATAATTGCTGCAGCGAATAGAAAAA
TTCCAGATGATCTATTGATTATTTCTTGCGAAGACGATAGAGATCTCTGTCTTCCTTTCATTGATCAAGGAGCTGAAATCTACACC
GCAGAGCTTTTGCTGAATGGAATCGTGATTCAGAAATTGGAATATGACAGGCATTGTCTCTTCTAAAATTGCTGGCAAAAGGAAAC
ACAAAGTTTGCAGCAACACATACGGATCTACTGGTTGGTGCAAGCAGTGAATGAAAGCCATTTTATCAAAATCTTTCAAAACCTGA
CTGTTTGTTATAAGAGATCTTTCATCATTCTATGGAAATAAGAATCTAGTACATAAAATTATGCAATTAACGTACATTACATCTAG
ACCTCTTCACACGGATTAGATTAGAAAAGGAGATTCAGCACCAGGGTTCTGATTGTTGAAGCCAACACTTGGTGGAGCAGCAGCTT
GATTTGTATGATAAGGAGGAGGAGGAGGAAGTCCACTGTAATTGGGAGGTGGCGCACCACCTTGACCTGGTATTGGAGCCAATCCT
GGTGGCCTAAGAATACCATTTTGTGGAGGTGGTGGTGGTAGAGGACCGCCGGGTGGTGCCATCATCTGTGGTACTCCTGGAGGAGG
CATGTAACCTGTAAAGGTAATAGACAGTACCTTGGCCAGGGATCATGGGTCTAAACAGAATAGGAGGTCGCATCCCCATAGGCATA
GGCATGGGCATCATAGGAAGGCGAGGTCTAGCGAGCATATGCTGATTAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192222 BRCT domain-containing DNA repair protein [Arabidopsis thaliana]3981e-036
XP_002874880 hypothetical protein ARALYDRAFT_911890 [Arabidopsis lyrata subsp. lyrata]3622e-032
XP_002520697 pax transcription activation domain interacting protein, putative [Ricinus communis]3416e-030
XP_002872794 hypothetical protein ARALYDRAFT_490249 [Arabidopsis lyrata subsp. lyrata]3353e-029
XP_002320375 predicted protein [Populus trichocarpa]3156e-027

Swiss-Prot top hits (Blast detail)Scoree value
B2AWS3 Actin cytoskeleton-regulatory complex protein PAN11432e-008
Q54WH2 Formin-A1371e-007
Q9T0K5 Leucine-rich repeat extensin-like protein 31343e-007
Q1DQC1 Actin cytoskeleton-regulatory complex protein PAN11343e-007
Q9FLQ7 Formin-like protein 201316e-007

TrEMBL top hits (Blast detail)Scoree value
B9S3X8 Pax transcription activation domain interacting protein, putative3414e-030
B9I9Y2 Predicted protein3154e-027
Q9ZR18 Putative uncharacterized protein AT4g031303137e-027
B8AXY3 Putative uncharacterized protein2886e-024
B9FMF2 Putative uncharacterized protein2886e-024

Arabidopsis top hits (Blast detail)Scoree value
AT4G03130.1 transcription coactivator3986e-039
AT3G21480.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: transcription coactivator (TAIR:AT4G03130.1); Has 489 Blast hits to 455 proteins in 115 species: Archae - 2; Bacteria - 37; Metazoa - 270; Fungi - 30; Plants - 45; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).2866e-026
AT4G03120.1 proline-rich family protein2517e-022
AT1G61080.1 proline-rich family protein1494e-010
AT4G13340.1 leucine-rich repeat family protein / extensin family protein1342e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
92  50%

Unigene MembersMember information