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Information for unigene UN14050
| FASTA Sequence |
| Unigene ID: UN14050 | Length: 1427 |
| SNP | GGGATTAACGACCATCATCGTCTCCGCGAGTTCCTCTCTGCATCATCAAGAGGCCATATAATAATTAAAAAAGTCGTTCCTTTTAG
GATTCCTTCTTCTCTCACACTTTGTCTTTCCAAATTAAAAAAAAATCCAAGGTGTGATCCTCTTCAAGGGGGAGCAGGTTCAATAC
ATTCTTACCGATCTAAAGCACTGGGGCACTCTTGTCGGTGAATAGAGACAGACAAAAAGGAAGAGATAATGGGGGTTCCGTTAGTA
TGCCACGGGCATTCTCGTCCCGTCGTCGACGTTTCTTACAGTCCGGTGACTCCAGATGGATTCTTCCTCATCAGCGCCAGCAAAGA
TTCGAACCCAATGTTGAGGAATGGGGAGACTGGTGATTGGATAGGGACTTTTGAAGGACATAAAGGAGCAGTTTGGAGTTGCAGCC
TTGATAAACATGCTATGCGCGCTGCCTCTGCTTCTGCTGATTTCACTGCGAAAATATGGAATGCATTGACTGGAGATGAATTGCAC
TCCTTTGAACACAAGCACATCGTTCGCGCATGTGCCTTCTCTGAGGACACTCACCTTTTGCTCACCGGTGGAATGGAGAAGATTCT
TCGGATATTCGATATGAACAGGCCAGACGCACCTCCTAAAGAAGTTGGAAACTCTCCTGGTTCAATCAGAACCGTAGAATGGCTTC
ACAGTGATAATACTATCCTGAGCTCTTGCACAGATACCGGTGACATTAGGTTATGGGACATAAGAAGTGACAAGATTGTTCAAACA
TTAGAAACCAAGTTCCCAGTCACTAGTGCTGAAGTAAGCCAGGATGGGCGATACATAACTACTGCTGATGGATCTAGTGTTAAGTT
TTGGGACGCCACTAATTTTGGATTGGTCAAGAGCTATGAGATGCCTTGCAACGTTGAATCAGCATCCTTGGAACCGAAACAAGGGA
ACACTTTCATTGCTGGAGGAGAAGACATGTGGGTCCATAGGTTTGATTTCCAGACTGGAGAAGAGATTGGGTGTAACAAGGGTCAC
CACGGACCAGTGCACTGCGTGAGGTATTCGCCAGGTGGGGAGTCATACACGTCAGGATCAGAAGACGGGACGGTCAGAATATGGGA
GGTTGTTGGTTCAGTGAACCAGGAGGAGAAGGAGAGCGATCAGAGCGGTAACGTGAAGCTTGTGGCAGAGGAGGTTGTGCGTAAAG
CTGAAAGTTTGCGTATCAGTGAGAAAGCTGCAGAAGCCAAATGAATACGTATTTAGCTTTTGTGATATAACTAATAGTTGCAGAAG
AGAATGATCCCTTCCAGTTTATCTTTTTTTTTTTGGCTTACAAGTTTGACCTGTTTTATCTTTTTTTTTTTCCTTCCAATAAATAA
ATATGAACACTTCCTCTCCCATCAATACTCATCACTTTCTCTCTACTTATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563978 serine-threonine kinase receptor-associated protein [Arabidopsis thaliana] | 1657 | 3e-182 |
| XP_002890105 transducin family protein [Arabidopsis lyrata subsp. lyrata] | 1657 | 3e-182 |
| XP_002285272 PREDICTED: hypothetical protein [Vitis vinifera] | 1462 | 1e-159 |
| XP_002298116 predicted protein [Populus trichocarpa] | 1440 | 4e-157 |
| XP_002303265 predicted protein [Populus trichocarpa] | 1432 | 4e-156 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9Y3F4 Serine-threonine kinase receptor-associated protein | 800 | 3e-084 |
| Q5E959 Serine-threonine kinase receptor-associated protein | 799 | 4e-084 |
| Q9Z1Z2 Serine-threonine kinase receptor-associated protein | 799 | 4e-084 |
| Q5XIG8 Serine-threonine kinase receptor-associated protein | 799 | 4e-084 |
| Q54LT8 Serine-threonine kinase receptor-associated protein | 786 | 1e-082 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI22 F9L1.42 protein | 1657 | 2e-182 |
| B9GKZ1 Predicted protein | 1440 | 3e-157 |
| B9GWN6 Predicted protein | 1432 | 3e-156 |
| B9RUZ3 Serine-threonine kinase receptor-associated protein, putative | 1427 | 1e-155 |
| B9STP9 Serine-threonine kinase receptor-associated protein, putative | 1409 | 1e-153 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G15470.1 transducin family protein / WD-40 repeat family protein | 1667 | 8e-186 |
| AT3G15610.1 transducin family protein / WD-40 repeat family protein | 1362 | 2e-150 |
| AT1G52730.2 transducin family protein / WD-40 repeat family protein | 1360 | 3e-150 |
| AT1G52730.1 transducin family protein / WD-40 repeat family protein | 1360 | 3e-150 |
| AT2G46290.1 eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative | 197 | 2e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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