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Information for unigene UN14057
| FASTA Sequence |
| Unigene ID: UN14057 | Length: 1030 |
SSR | | GAGAGTGAAAAAAATTAAAGTTTTGGCACGAAGTAATTTGAGTGCACGACATTTTGAACATAATTTTAGATTCTTAACAAGTTCCA
AAAGTTTTACAGAAGCAATAACCATCAAGTTTGTTCAACCAGCCAGAGAAAACAAAAGATGGCATTAGTATTCAAATCAGGCTCGG
GCAAGGTGAAAGTTTACTCTACTTCAGCCAAGTAATCGTCGATCTCTGCAGGTGTTAGTACCCTGAAAACTTTGTCAGCACCAATC
TTGCCAATCTCAATGTTTTTGCTCGAGATTTCTCCCTCAAAACCTTCCTTCAAAGTTAATATCGCAGTGTGAATGGCATCATCAAG
TTCCATATCTTCAGTGTACCTCTTCTCAAGAAATGTCTTAGCATTTGAAACATTCTTTCCCATGGCAGAAGCTTTCCATGAGAAAT
AAGAGCCAGACGGATCCACCTGATAGAGCTGAGGACCTTTGTCATCGTACCCAGCCACTAGTAGAGAAACTCCAAATGGCCTAACA
CCACCTGATTGAGTGAACTCTTGCATCACCGTTGCGGTTTCCCTTACAAGTTGAGTAACAGGGATGGGTTCTTTGTAGAGACGGTT
ATATTGCTCAGCCTGCTTCCTACTCTTTCGCACAAGAACTCGGAAATCAGGACCCATACCACTGTAAGCAACTCCAATGTTGGGAG
TCAAATGCTGAATCTTTTGAATAGACGCTTCATCAACCAGAATGGAAGGAAGTTTCTTCTCTGTTGCAATGACGACTCCGTTTGAA
GCTTTGATTCCCAAAGATGTTTGGCCTGATCCAACAGCTGTAAGAGCATGATCTATCTGAACCAGCTTCCCTGATGGGCTGAACGT
AGTGAGAGAAAACGAGTACTGACTGTCTCCCATTGCACCTTTAAGCTTAGCTCAGAAAAAAAGAAAACCTTTGATTTGATGTACGG
ATCGAACAACAGAATGGACGCAGTAGAGAGAGGGAGAGAGAGAGAGGGAGAGAGACTGATAAATAAAGCTTTTAGGTTTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173096 proteasome subunit alpha type-2-A [Arabidopsis thaliana] | 1167 | 1e-125 |
| XP_002889236 hypothetical protein ARALYDRAFT_895825 [Arabidopsis lyrata subsp. lyrata] | 1163 | 4e-125 |
| XP_002890168 hypothetical protein ARALYDRAFT_471845 [Arabidopsis lyrata subsp. lyrata] | 1163 | 4e-125 |
| NP_178042 proteasome subunit alpha type-2-B [Arabidopsis thaliana] | 1159 | 1e-124 |
| XP_002513374 proteasome subunit alpha type, putative [Ricinus communis] | 1128 | 4e-121 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23708 Proteasome subunit alpha type-2-A | 1167 | 5e-127 |
| Q8L4A7 Proteasome subunit alpha type-2-B | 1159 | 5e-126 |
| A2YVR7 Proteasome subunit alpha type-2 | 1065 | 4e-115 |
| Q10KF0 Proteasome subunit alpha type-2 | 1065 | 4e-115 |
| Q54DM7 Proteasome subunit alpha type-2 | 814 | 5e-086 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RI05 Proteasome subunit alpha type | 1128 | 3e-121 |
| A9PAG0 Proteasome subunit alpha type | 1121 | 2e-120 |
| C6TH59 Proteasome subunit alpha type | 1113 | 2e-119 |
| C6TKI4 Proteasome subunit alpha type | 1100 | 5e-118 |
| Q38M52 Proteasome subunit alpha type | 1096 | 1e-117 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G16470.1 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase | 1168 | 4e-128 |
| AT1G16470.2 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase | 1168 | 4e-128 |
| AT1G79210.1 20S proteasome alpha subunit B, putative | 1160 | 3e-127 |
| AT1G79210.2 20S proteasome alpha subunit B, putative | 1160 | 3e-127 |
| AT1G79210.3 20S proteasome alpha subunit B, putative | 1160 | 3e-127 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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