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Information for unigene UN14086

FASTA Sequence
Unigene ID: UN14086Length: 964  SNP
GGATATTTCGGACGAAAACAATAATTATTTTCATCATCAATTCATTGCTCCTCCGATCGATTCTGACACCGTAGTTCTTCTTCCCC
GTTCGTTTCTCAGAGAGTATCGGAACAATGAGTGAGGTGTTTAACGGATACGAGCGCCAATACTGCGACCTATCTGCCAGTCTTTC
CAAGAAATGTTCCTCTGCTGTTTCCCTTGATGGAGAACAAAAGAAGCAGAAGCTCTCTGAAATCAAATCTGGCCTTGAACTTGCAG
AAGCATTGATTAGGAAAATGGATCTTGAGGCGAGGAGCCTCCCACCCGGTGTTAAATCCAGCCTCCTTGTCAAGTTAAGAGAGTTC
AAGTCTGATCTTAACAACTTCAAAACCGAAGTTAAGAGAATCACATCTGGAAACTTGAACGCTGCTGCTCGAGACGAGTTGCTTGA
AGCTGGTCTGGCTGACACGAAGACGGCTTCAGCTGATCAAAGATCAAGACTGATGATGTCAACAGAACGTTTGGGCCGTACTTCAG
ACAGACTCAAGGACAGTCGTAGAACAATGATGGAGACTGAAGAGATTGGCGTTTCAATCCTCCAAGACTTGCACGGTCAGAGACAA
TCTCTCCTACGTGCCGGGGATACGCTTAGTGGAGTAGACGAGAATGTTGGAAAGAGCAAGAAGATCTTGACAGGTATGACGAGGAG
GATGAACAGGAACAAATGGACCATTGGAGCCATTATCACCGCTTTGGTTGTGGCCATTATCATCATCTTGTACTTCAAACTCACCA
AGTAACTGAGTCAAATCTTTCTCACTGAACGAAAACTGTTGTCCTCGTTTCTGAATCTTTGATTTTTCTTTCTTTTTTATTTTTGC
TTTGAGTGAAAAGTTGTCTTTGCCACCTTTTTATTATCGCCTCAAGAAAGTAAGTCCTCAGATTGTTTTGTTGAGTTTGCAAATGC
ATTTGTTATATTTAGTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34483 unnamed protein product [Thellungiella halophila]10092e-107
XP_002870775 v-SNARE AtVTI1a [Arabidopsis lyrata subsp. lyrata]9895e-105
NP_198767 vesicle transport v-SNARE 11 [Arabidopsis thaliana]9805e-104
AAF24061 v-SNARE AtVTI1a [Arabidopsis thaliana]9762e-103
XP_002877155 vesicle transport v-SNARE 13 [Arabidopsis lyrata subsp. lyrata]9375e-099

Swiss-Prot top hits (Blast detail)Scoree value
Q9SEL6 Vesicle transport v-SNARE 119802e-105
Q9LVP9 Vesicle transport v-SNARE 139311e-099
Q9SEL5 Vesicle transport v-SNARE 126658e-069
O89116 Vesicle transport through interaction with t-SNAREs homolog 1A3351e-030
Q96AJ9 Vesicle transport through interaction with t-SNAREs homolog 1A3119e-028

TrEMBL top hits (Blast detail)Scoree value
B9SVJ2 Vesicle transport V-snare protein vti1a, putative8541e-089
Q307Y3 Vesicle transport v-SNARE 11-like8471e-088
C6T736 Putative uncharacterized protein8442e-088
C6TGN3 Putative uncharacterized protein8442e-088
Q3HVM2 Putative uncharacterized protein8406e-088

Arabidopsis top hits (Blast detail)Scoree value
AT5G39510.1 SGR4 (SHOOT GRAVITROPSIM 4); receptor9812e-106
AT3G29100.1 VTI13; SNARE binding / receptor7364e-078
AT1G26670.1 VTI1B; SNARE binding / receptor/ soluble NSF attachment protein6657e-070
AT5G39630.1 vesicle transport v-SNARE family protein4409e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  36%
 
115  45%
 
62  18%

Unigene MembersMember information