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Information for unigene UN14094

FASTA Sequence
Unigene ID: UN14094Length: 1437 SSR 
GAGAGAATAAAACCTAGTAATCATTTTATAGAAGAAATCACTTGAGTTTCAGATTCTAACAAAATGCATAAAAAGACACATGTTCA
ACAGGACTTGAACATTATTTCAATTTTAAAGAGAGATAGATAGATAATCTTCTAGCTACTGGTCGTAGCCTCAGCACTCTTCTTGT
TGTAATCTTCAAGTTCCTTCTTGTATGCTTCCATCAACTTTGCTGCTTTGTTGTTGTAACTTTGCTTCTCTTCTTCACCCAATTCC
TTCCATTTCACTGAGATTAGAGCGGTAACTGTTGAGTTGCTCGTCCCAGGACGTTCTTCTGTCAAAGTCTTCCTTGCATCTTTGCT
GAAGAGAAAGAATGATGAAGCAGGCTTCTTGGGTTTGTTTGGGTCAACGTTTTCGTTCTTCTTCTTCTTGGTCTCTTTTTCCTTCT
TGATCAGATTGTCTGTTTTCTCCTTCTTCTTAAGAAGCTGGAGAGCTTCCTGTTTGTGGAGTTTCAAGAGCTCCTCTTCTTCTTTC
TTCTGGCTCATCGCCTCTTCTTCCTTCGTTCTTTTGTACTCCTCCATTGCTTGCAGGTATGTCTCCTTGTTCTTCTTCGCCACCTC
TTCGAAGGGTGCTTTTTGTTTATCTGACAACTTCTTCCACTCTTCTCCTGTCATCTTTGCGACCTCCACAACGTTCTTGTTCTCTT
CACGTAACTCAGCTCTCCTCTGGTTGGCATAAACCAGGAAGGCGGATATGGGATGCTTTGGCTTCCGAGGATCCTTCTGCTTCTTG
CTCTTCTTCTTGTTGTCCTGTTCACCTTCCTGCACAAACTGCAGATACTGATCAAGCAAATCCATAGCAGTCTTCTGCTTCTGCCC
ATCATCCAGAAGCTTCATGGCCTCTCTCTCACGCTTCTCCTTAGCAACCACCTGGAGGTAAGCTTCCTTTTCCACCTTGTACCTCT
CCTCGTAAGGCTTCTTCTCTTCCGCGCTAAGAGACTTCCATTTAGCGCCGAGAATGTTCGAAGTCTCCTTAAAGTCAGCTTCAGGA
TTCTCCTTCTTGATTTCATCCCTCTGCTCCTTGCACCACAGAATGTATGACGACGATGGTCGCTTCCTCTCGGGACAATCCTTCTT
CTTCTTCTTGTTGTTCACTTTTTCTTCCTCACCTTGTGTGAGAGTCTGGCCACAAGCAAACGTCATGTTAGGTTTGAACTCCTTCA
TCTTCTGAAGCTTCTTCAGCTCCGTCTTGAGCCTCTCCTGCTCAGCGTCTCTCGTTACGAGCTCCTCCTCCTTCTTCCTCAGAATC
TCCTCCTTTTCCTTAAGCAACTCCTCCGTCTTATCCTTCTCGATCGTCATCTTCTCCAGCATCGCCTGCATCTCCAACAGATCTTT
CTCGAACGACTTCTTCCCCTTGGCGGCGGAGACAGGCGACGAAGGAGTCTCCGCCGTCGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194111 HMG (high mobility group) box protein [Arabidopsis thaliana]18681e-206
ACC91248 high mobility group HMG1/2 family protein [Arabidopsis halleri]18643e-206
NP_001190816 HMG (high mobility group) box protein [Arabidopsis thaliana]18142e-200
NP_192846 HMG (high mobility group) box protein [Arabidopsis thaliana]16332e-179
XP_002874673 hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp. lyrata]15857e-174

Swiss-Prot top hits (Blast detail)Scoree value
P40618 High mobility group protein B31911e-013
P36194 High mobility group protein B11902e-013
P52925 High mobility group protein B21892e-013
P40673 High mobility group protein B21874e-013
P26583 High mobility group protein B21874e-013

TrEMBL top hits (Blast detail)Scoree value
Q9SUP7 98b like protein18687e-207
B2WS76 High mobility group HMG1/2 family protein18642e-206
Q9T012 98b like protein16331e-179
Q700E0 At4g1108015263e-167
B9RCQ0 Transcription factor, putative14028e-153

Arabidopsis top hits (Blast detail)Scoree value
AT4G23800.1 high mobility group (HMG1/2) family protein18693e-209
AT4G11080.1 high mobility group (HMG1/2) family protein16337e-182
AT3G51880.1 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor1847e-014
AT3G51880.2 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor1847e-014
AT3G51880.3 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor1847e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
76  100%

Unigene MembersMember information